| Pathway ID | Pathway Term | Pathway Source |
Proteins |
h_RELAPathway | Acetylation and Deacetylation of RelA in The Nucleus | BioCarta |
CREBBP, EP300, NFKB1, RELA, TNF, TNFRSF1B, TRADD, RIPK1, FADD, HDAC3 |
h_RNApol3Pathway | RNA polymerase III transcription | BioCarta |
SSB, GTF3C4 |
h_RacCycDPathway | Influence of Ras and Rho proteins on G1 to S Transition | BioCarta |
AKT1, RHOA, CDK2, CDK4, E2F1, NFKB1, PIK3CA, PIK3R1, MAPK1, MAPK3, RAC1, RAF1, RB1, RELA, TFDP1, CDK6, CDKN1A, CDKN1B |
h_SARSpathway | SARS Coronavirus Protease | BioCarta |
MAPK14, EIF4E, LDHA, LDHB |
h_TPOPathway | TPO Signaling Pathway | BioCarta |
FOS, GRB2, JUN, PIK3CA, PIK3CG, PIK3R1, PRKCA, PRKCB, SOS1, JAK2, MAPK3, MAP2K1, RAF1, RASA1, STAT3, STAT5A, STAT5B |
h_WNVpathway | West Nile Virus | BioCarta |
CASP9, EEF1A1, TIA1 |
h_aMANpathway | Steps in the Glycosylation of Mammalian N-linked Oligosaccarides | BioCarta |
MAN1A1, MAN2A2, MAN2B1, MAN1C1, FUT4, FUT7, ST3GAL4, ST8SIA4, B3GALT2 |
h_ace2Pathway | Angiotensin-converting enzyme 2 regulates heart function | BioCarta |
AGT, AGTR1, AGTR2, COL4A2, COL4A3, COL4A6, ACE |
h_achPathway | Role of nicotinic acetylcholine receptors in the regulation of apoptosis | BioCarta |
AKT1, BAD, FOXO3, MUSK, PIK3CA, PIK3CG, PIK3R1, PTK2, YWHAH, CHRNB1 |
h_acrPathway | Ahr Signal Transduction Pathway | BioCarta |
ARNT, HSP90AA1, AHR, AIP |
h_actinYPathway | Y branching of actin filaments | BioCarta |
NTRK1, RAC1, WASL, ARPC4, ARPC3, ACTR3, ACTR2, ARPC2, ABI2, WASF2 |
h_agpcrPathway | Attenuation of GPCR Signaling | BioCarta |
GNAS, GNB1, PRKAR1A, PRKAR2A, PRKAR2B, PRKCA, PRKCB |
h_agrPathway | Agrin in Postsynaptic Differentiation | BioCarta |
CDC42, EGFR, NRG1, ITGB1, JUN, PAK2, MAPK1, MAPK3, MAPK8, PTK2, RAC1, DAG1, DMD, CTTN, LAMA2, LAMA3, LAMA4, MUSK, PAK3, GIT2, PAK7 |
h_ahspPathway | Hemoglobin's Chaperone | BioCarta |
ALAD, CPOX, HBA1, HBB, UROD |
h_aifPathway | Opposing roles of AIF in Apoptosis and Cell Survival | BioCarta |
PARP1, AIFM1, CYCS |
h_akap13Pathway | Rho-Selective Guanine Exchange Factor AKAP13 Mediates Stress Fiber Formation | BioCarta |
RHOA, GNA12, PRKAG1, PRKAR2A, PRKAR2B, AKAP13 |
h_akap95Pathway | AKAP95 role in mitosis and chromosome dynamics | BioCarta |
CCNB1, CDK1, PPP1CA, PRKAG1, PRKAR2A, PRKAR2B, DDX5, NCAPD2 |
h_akapCentrosomePathway | Protein Kinase A at the Centrosome | BioCarta |
RHOA, CDK1, PPP1CA, PRKAG1, PRKAR2A, PRKAR2B, PKN1, MAP2, PCNT, NUP85 |
h_aktPathway | AKT Signaling Pathway | BioCarta |
AKT1, BAD, CASP9, FOXO3, GH1, GHR, HSP90AA1, FOXO4, NFKB1, PIK3CA, PIK3CG, PIK3R1, RELA, YWHAH, FOXO1 |
h_alkPathway | ALK in cardiac myocytes | BioCarta |
APC, CTNNB1, GATA4, GSK3B, SMAD1, SMAD4, SMAD5, MEF2C, MAP3K7, HNF1A, TGFB1, TGFB2, TGFBR1, TGFBR2, TGFBR3, AXIN1, ACVR1, BMP2, BMP4, BMPR1A, BMPR2, SMAD6, NPPB, BMP10 |
h_alternativePathway | Alternative Complement Pathway | BioCarta |
CFB, C3, C6, C7, CFP |
h_amiPathway | Acute Myocardial Infarction | BioCarta |
SERPINC1, COL4A2, COL4A3, COL4A6, F2, F2R, FGA, FGB, FGG, PLAT, PLG, TFPI |
h_anthraxPathway | Anthrax Toxin Mechanism of Action | BioCarta |
MAP2K1, MAP2K2, BLOC1S6 |
h_antisensePathway | RNA polymerase III transcription | BioCarta |
NONO, SFPQ, MATR3 |
h_appPathway | Generation of amyloid b-peptide by PS1 | BioCarta |
APP, PSEN1, ADAM10 |
h_arapPathway | ADP-Ribosylation Factor | BioCarta |
ARF1, COPA, GPLD1, GBF1, ASAP2, CYTH3, CYTH2, ARFGEF2, KDELR1, KDELR3, ARFGAP3, ASAP1, ARAP2, ARAP1 |
h_arenrf2Pathway | Oxidative Stress Induced Gene Expression Via Nrf2 | BioCarta |
CREB1, MAPK14, FOS, HMOX1, JUN, PRKCA, PRKCB, MAPK1, MAPK8, CRYZ, MAFG, AKR7A2, MAFF |
h_arfPathway | Tumor Suppressor Arf Inhibits Ribosomal Biogenesis | BioCarta |
E2F1, MDM2, MYC, PIK3CA, PIK3CG, PIK3R1, RAC1, RB1, TP53, TWIST1, POLR1C, POLR1A, POLR1D |
h_argininecPathway | Catabolic Pathways for Arginine , Histidine, Glutamate, Glutamine, and Proline | BioCarta |
GLS, PRODH |
h_asbcellPathway | Antigen Dependent B Cell Activation | BioCarta |
FAS, CD4, CD28, CD40LG, HLA-DRA, HLA-DRB1, IL10 |
h_atmPathway | ATM Signaling Pathway | BioCarta |
BRCA1, CDKN1A, CHEK1, GADD45A, JUN, MDM2, MRE11A, NBN, NFKB1, MAPK8, RAD51, RELA, TP53, RAD50 |
h_atrbrcaPathway | Role of BRCA1, BRCA2 and ATR in Cancer Susceptibility | BioCarta |
BRCA1, CHEK1, FANCD2, FANCE, FANCG, TP53, BRCA2, MRE11A, NBN, RAD1, RAD9A, RAD51, RAD50 |
h_bArrestin-srcPathway | Roles of ?-arrestin-dependent Recruitment of Src Kinases in GPCR Signaling | BioCarta |
GNAS, GNB1, KCNA1, MAPK1, MAPK3, MAP2K1, MAP2K2, RAF1, PLCB1, FGR |
h_bArrestinPathway | �-arrestins in GPCR Desensitization | BioCarta |
AP2M1, GNAS, GNB1, PPARA, PLCB1, KCNA1 |
h_badPathway | Regulation of BAD phosphorylation | BioCarta |
AKT1, BAD, BAX, BCL2, IGF1, IGF1R, KIT, KITLG, PIK3CA, PIK3CG, PIK3R1, PRKAR1A, PRKAR2A, PRKAR2B, MAPK1, MAPK3, RPS6KA1, YWHAH |
h_bard1Pathway | BRCA1-dependent Ub-ligase activity | BioCarta |
BRCA1, BARD1, FANCD2, FANCE, FANCG |
h_barr-mapkPathway | Role of ?-arrestins in the activation and targeting of MAP kinases | BioCarta |
GNAS, GNB1, KCNA1, MAPK1, MAPK3, MAP2K1, MAP2K2, RAF1, PLCB1 |
h_bbcellPathway | Bystander B Cell Activation | BioCarta |
FAS, CD4, CD28, CD40LG, HLA-DRA, HLA-DRB1 |
h_bcellsurvivalPathway | B Cell Survival Pathway | BioCarta |
AKT1, XIAP, FOS, ITGB1, JUND, PIK3CA, PIK3CG, PIK3R1, BIRC5, ZBTB7A |
h_bcrPathway | BCR Signaling Pathway | BioCarta |
CALM2, CALM3, MAPK14, ELK1, FOS, GRB2, JUN, LYN, NFATC1, NFATC2, NFATC4, PPP3CA, PRKCA, PRKCB, MAPK3, MAPK8, MAP2K1, RAC1, RAF1, SOS1, SYK, VAV1, BLNK |
h_biopeptidesPathway | Bioactive Peptide Induced Signaling Pathway | BioCarta |
AGT, AGTR2, CALM2, CALM3, CAMK2D, CDK5, MAPK14, F2, FYN, GNAI1, GNB1, GRB2, JAK2, KNG1, MAPT, MYLK, PRKCA, PRKCB, MAPK1, MAPK3, MAPK8, MAP2K1, MAP2K2, RAF1, SOS1, STAT3, STAT5A, GNA11 |
h_blymphocytePathway | B Lymphocyte Cell Surface Molecules | BioCarta |
HLA-DRA, HLA-DRB1, ICAM1, ITGB2, PTPRC, CR1, FCGR2B |
h_botulinPathway | Blockade of Neurotransmitter Relase by Botulinum Toxin | BioCarta |
SNAP25, VAMP2 |
h_btg2Pathway | BTG family proteins and cell cycle regulation | BioCarta |
PRMT1, NGF, RB1, TP53, CHAF1A, BTG1, BTG2, CHAF1B |
h_calcineurinPathway | Effects of calcineurin in Keratinocyte Differentiation | BioCarta |
CALM2, CALM3, CDKN1A, GNAQ, NFATC1, NFATC2, NFATC4, PPP3CA, PRKCA, PRKCB, SP3, MARCKS |
h_cardiacegfPathway | Role of EGF Receptor Transactivation by GPCRs in Cardiac Hypertrophy | BioCarta |
AGT, RHOA, EDN1, EGFR, FOS, JUN, MYC, NFKB1, PRKCA, PRKCB, RELA, AGTR2, EDNRA, ADAM12 |
h_carm-erPathway | CARM1 and Regulation of the Estrogen Receptor | BioCarta |
BRCA1, CREBBP, EP300, ESR1, GTF2A1, GTF2F1, HDAC1, HDAC2, MEF2C, POLR2A, NRIP1, HDAC3, NCOR2, HDAC4, SRA1, HDAC6, HDAC5, CARM1, PPARGC1A, NR0B1, PHB2, SPEN |
h_carm1Pathway | Transcription Regulation by Methyltransferase of CARM1 | BioCarta |
CREB1, CREBBP, EP300, PRKAR1A, PRKAR2A, PRKAR2B, CARM1 |
h_caspasePathway | Caspase Cascade in Apoptosis | BioCarta |
PARP1, BIRC3, XIAP, ARHGDIB, CASP1, CASP6, CASP8, CASP9, DFFA, LMNA, LMNB1, CEP104, CYCS, LMNB2, CASP4 |
h_cb1rPathway | Metabolism of Anandamide, an Endogenous Cannabinoid | BioCarta |
PLD1, CNR1 |
h_cblPathway | CBL mediated ligand-induced downregulation of EGF receptors | BioCarta |
CSF1R, EGFR, GRB2, MET, PDGFRA, PRKCA, PRKCB, SH3GLB1 |
h_cd40Pathway | CD40L Signaling Pathway | BioCarta |
CD40LG, DUSP1, NFKB1, RELA, TNFAIP3, IKBKAP |
h_cdMacPathway | Cadmium induces DNA synthesis and proliferation in macrophages | BioCarta |
FOS, JUN, MYC, NFKB1, PRKCA, PRKCB, MAPK1, MAPK3, MAP2K1, RAF1, RELA, TNF, PLCB1 |
h_cdc25Pathway | cdc25 and chk1 Regulatory Pathway in response to DNA damage | BioCarta |
CDK1, CDC25A, CDC25B, CDC25C, CHEK1, WEE1, YWHAH |
h_cdc42racPathway | Role of PI3K subunit p85 in regulation of Actin Organization and Cell Migration | BioCarta |
RHOA, CDC42, PDGFRA, PIK3CA, PIK3R1, RAC1, WASL, ARPC4, ARPC3, ACTR3, ACTR2, ARPC2 |
h_cdk5Pathway | Phosphorylation of MEK1 by cdk5/p35 down regulates the MAP kinase pathway | BioCarta |
CDK5, KLK2, NGF, NGFR, MAPK1, MAPK3, MAP2K1, MAP2K2, RAF1, EGR1 |
h_cell2cellPathway | Cell to Cell Adhesion Signaling | BioCarta |
ACTN1, ACTN2, CSK, CTNNB1, PECAM1, PTK2, CTNNA1, CTNNA2 |
h_cellcyclePathway | Cyclins and Cell Cycle Regulation | BioCarta |
CCNB1, CDK1, CDC25A, CDK2, CDK4, CDK6, CDK7, CDKN1A, CDKN1B, CDKN2B, E2F1, RB1, RBL1, TFDP1, CCNA1, CCND2, CCND3, CDKN2C |
h_ceramidePathway | Ceramide Signaling Pathway | BioCarta |
BAD, BAX, BCL2, CASP8, NFKB1, MAPK1, MAPK3, MAPK8, MAP2K1, RAF1, RELA, TRADD, RIPK1, FADD, AIFM1, CYCS, NSMAF |
h_cftrPathway | Cystic fibrosis transmembrane conductance regulator (CFTR) and beta 2 adrenergic receptor (b2AR) pathway | BioCarta |
ADRB2, GNAS, PRKAR1A, PRKAR2A, PRKAR2B, EZR, CFTR |
h_chemicalPathway | Apoptotic Signaling in Response to DNA Damage | BioCarta |
PARP1, AKT1, BAD, BAX, BCL2, BID, CASP6, CASP9, EIF2S1, PRKCA, PRKCB, PTK2, TLN1, TP53, CYCS |
h_chrebpPathway | ChREBP regulation by carbohydrates and cAMP | BioCarta |
GNAS, GNB1, PRKAA2, PRKAG1, PRKAR1A, PRKAR2A, PRKAR2B, PRKAG3 |
h_circadianPathway | Circadian Rhythms | BioCarta |
ARNTL, CRY1, CSNK1E, PER1 |
h_ck1Pathway | Regulation of ck1/cdk5 by type 1 glutamate receptors | BioCarta |
CDK5, CSNK1D, PPP1CA, PPP3CA, PRKAR1A, PRKAR2A, PRKAR2B, PLCB1, DRD2 |
h_classicPathway | Classical Complement Pathway | BioCarta |
C1QA, C1R, C1S, C3, C4A, C4B, C6, C7 |
h_compPathway | Complement Pathway | BioCarta |
C3, C4A, C4B, C6, C7, MBL2, MASP2, CFB, C1QA, C1R, C1S |
h_cpsfPathway | Polyadenylation of mRNA | BioCarta |
CSTF3, PABPN1, PAPOLA, CPSF1, CPSF2 |
h_cptPathway | Mitochondrial Carnitine Palmitoyltransferase (CPT) System | BioCarta |
CPT1A, ACSS2 |
h_crebPathway | Transcription factor CREB and its extracellular signals | BioCarta |
AKT1, CAMK2D, CREB1, MAPK14, GNAS, GRB2, PIK3CA, PIK3R1, PRKAR1A, PRKAR2A, PRKAR2B, PRKCA, PRKCB, MAPK1, MAPK3, RAC1, RPS6KA1, SOS1, RPS6KA5 |
h_cremPathway | Regulation of Spermatogenesis by CREM | BioCarta |
CREM, GNAS, XPO1, FSHB, FSHR |
h_ctbp1Pathway | SUMOylation as a mechanism to modulate CtBP-dependent gene responses | BioCarta |
UBE2I, SAE1, ZEB1 |
h_ctcfPathway | CTCF: First Multivalent Nuclear Factor | BioCarta |
CDKN1B, SMAD1, SMAD4, SMAD5, MDM2, MYC, PIK3CA, PIK3CG, PIK3R1, PTEN, TGFB1, TGFB2, TGFBR1, TGFBR2, TGFBR3, TP53 |
h_ctlPathway | CTL mediated immune response against target cells | BioCarta |
FAS, B2M, HLA-A, ICAM1, ITGB2 |
h_ctla4Pathway | The Co-Stimulatory Signal During T-cell Activation | BioCarta |
CD28, GRB2, HLA-DRA, HLA-DRB1, PIK3CA, PIK3R1, PTPN11 |
h_cxcr4Pathway | CXCR4 Signaling Pathway | BioCarta |
GNAI1, GNAQ, GNB1, NFKB1, PIK3CA, PIK3R1, PRKCA, PRKCB, MAPK1, MAPK3, MAP2K1, PTK2, RAF1, RELA, CXCR4, CXCL12 |
h_cytokinePathway | Cytokine Network | BioCarta |
IL1A, IL6, CXCL8, IL10, IL12A, IL18, TNF |
h_d4gdiPathway | D4-GDI Signaling Pathway | BioCarta |
PARP1, ARHGAP5, ARHGDIB, CASP1, CASP8, CASP9, JUN, CYCS |
h_dbpbPathway | Transcriptional activation of dbpb from mRNA | BioCarta |
F2, YBX1, PDGFB, PROCR |
h_dcPathway | Dendritic cells in regulating TH1 and TH2 Development | BioCarta |
IL10, IL12A, TLR2, TLR4, CD33, ITGAX |
h_deathPathway | Induction of apoptosis through DR3 and DR4/5 Death Receptors | BioCarta |
BIRC3, XIAP, BCL2, BID, CASP6, CASP8, CASP9, DFFA, LMNA, NFKB1, RELA, TRADD, RIPK1, FADD, CFLAR, CEP104, CYCS, TNFRSF25, TNFSF10 |
h_dicerPathway | Dicer Pathway | BioCarta |
DICER1, AGO2, AGO4 |
h_dreampathway | Repression of Pain Sensation by the Transcriptional Regulator DREAM | BioCarta |
CREB1, FOS, JUN, POLR2A, PRKAR1A, PRKAR2A, PRKAR2B, MAPK3, CREM |
h_dspPathway | Regulation of MAP Kinase Pathways Through Dual Specificity Phosphatases | BioCarta |
MAPK14, DUSP1, MAPK3, MAPK8, DUSP2, DUSP6, DUSP8, DUSP9 |
h_ecmPathway | Erk and PI-3 Kinase Are Necessary for Collagen Binding in Corneal Epithelia | BioCarta |
RHOA, ARHGAP5, FYN, ITGB1, MYLK, PFN1, PIK3CA, PIK3CG, PIK3R1, MAPK1, MAPK3, MAP2K1, PTK2, RAF1, TLN1 |
h_edg1Pathway | Phospholipids as signalling intermediaries | BioCarta |
AKT1, RHOA, GNAI1, GNB1, ITGB3, PDGFA, PDGFRA, PIK3CA, PIK3CG, PIK3R1, PRKCA, PRKCB, MAPK1, MAPK3, PTK2, RAC1, PLCB1, ASAH1, S1PR1, ITGAV, SPHK1, SPHKAP |
h_eea1Pathway | The role of FYVE-finger proteins in vesicle transport | BioCarta |
EGFR, RAB5A, EEA1, TF, TFRC |
h_egfPathway | EGF Signaling Pathway | BioCarta |
EGFR, ELK1, FOS, GRB2, JAK1, JUN, PIK3CA, PIK3R1, PRKCA, PRKCB, MAPK3, MAPK8, MAP2K1, RAF1, RASA1, SOS1, STAT3, STAT5A |
h_egfr_smrtePathway | Map Kinase Inactivation of SMRT Corepressor | BioCarta |
MAPK14, EGFR, MAP2K1, NCOR2, THRA, ZBTB16 |
h_eicosanoidPathway | Eicosanoid Metabolism | BioCarta |
PLA2G4A, PTGS1, PLCB1, ALOX5, EPHX1, PTGER2, PTGER3, PTGER4, PTGFR, PTGIS, PTGS2, PTGES |
h_eif2Pathway | Regulation of eIF2 | BioCarta |
EIF2S1, EIF2S3, EIF5, GSK3B, EIF2B5, PPP1CA, EIF2AK4 |
h_eif4Pathway | Regulation of eIF4e and p70 S6 Kinase | BioCarta |
AKT1, MAPK14, EIF4A1, EIF4A2, EIF4E, EIF4EBP1, GHR, IRS1, PIK3CA, PIK3R1, PRKCA, PRKCB, MAPK1, MAPK3, PTEN, MKNK1, EIF4G3 |
h_eifPathway | Eukaryotic protein translation | BioCarta |
EIF1AX, EIF2S1, EIF2S3, EIF4A1, EIF4A2, EIF4E, EIF3A, EIF4G3, EIF1, EEF2, EIF5, EIF6 |
h_eosinophilsPathway | The Role of Eosinophils in the Chemokine Network of Allergy | BioCarta |
HLA-DRA, HLA-DRB1, CCL5 |
h_ephA4Pathway | Eph Kinases and ephrins support platelet aggregation | BioCarta |
FYN, ITGB1, LYN, EPHA4, EPHB1 |
h_epoPathway | EPO Signaling Pathway | BioCarta |
ELK1, FOS, GRB2, JAK2, JUN, MAPK3, MAPK8, MAP2K1, RAF1, SOS1, STAT5A, STAT5B, EPOR |
h_eponfkbPathway | Erythropoietin mediated neuroprotection through NF-kB | BioCarta |
ARNT, CDKN1A, EPOR, HIF1A, JAK2, NFKB1, RELA, SOD2 |
h_eradPathway | ER�associated degradation (ERAD) Pathway | BioCarta |
SKP1, UBE2I, RBX1, SAE1, CANX, MAN1A1, MAN2A2, MAN2B1, EDEM1, GANAB, SEC61A1, UGGT1, MAN1C1 |
h_erbB4pathway | g-Secretase mediated ErbB4 Signaling Pathway | BioCarta |
ERBB4, PRKCA, PRKCB, PSEN1, ADAM17 |
h_erk5Pathway | Role of Erk5 in Neuronal Survival | BioCarta |
AKT1, CREB1, GRB2, MEF2A, MEF2C, MEF2D, NTRK1, PIK3CA, PIK3CG, PIK3R1, MAPK1, MAPK3, MAPK7, RPS6KA1 |
h_erkPathway | Erk1/Erk2 Mapk Signaling pathway | BioCarta |
EGFR, ELK1, GNAS, GNB1, MKNK2, GRB2, IGF1R, ITGB1, KLK2, MYC, NGF, NGFR, PDGFRA, MAPK1, MAPK3, MAP2K1, MAP2K2, RAF1, RPS6KA1, SOS1, STAT3, MKNK1, RPS6KA5 |