Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0050667

BP

homocysteine metabolic process

The chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid. Homocysteine is an important intermediate in the metabolic reactions of its S-methyl derivative, methionine.

CBS, MTHFR, NOX4

GO:0050668

BP

positive regulation of homocysteine metabolic process

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.

COMT

GO:0050671

BP

positive regulation of lymphocyte proliferation

Any process that activates or increases the rate or extent of lymphocyte proliferation.

IL12A, ZNF335

GO:0050672

BP

negative regulation of lymphocyte proliferation

Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation.

GAL

GO:0050673

BP

epithelial cell proliferation

The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances.

KIT, COL8A2, PSEN1, C6orf89, EHF

GO:0050678

BP

regulation of epithelial cell proliferation

Any process that modulates the frequency, rate or extent of epithelial cell proliferation.

SERPINB5, SMAD3, HES1, FRS2

GO:0050679

BP

positive regulation of epithelial cell proliferation

Any process that activates or increases the rate or extent of epithelial cell proliferation.

TBX1, EGFR, MYC, TGFA, TGFB1, ERBB2, IGF1, IL6, LAMB1, LAMC1, BMP4, CCL5, NME1, VEGFA, C5AR1, FGF7, FGFR2, BMP6, NME2, FGF9, BMPR1A, ID1, NOTCH1, SOX9, DLX5, MAP2K5, TWIST1, SFRP1, WDR48, OSR1, NR4A3, HTRA1, BAD, ESRP2

GO:0050680

BP

negative regulation of epithelial cell proliferation

Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation.

EREG, MTSS1, TGFB1, RB1, AR, BMP4, FGFR2, PBLD, WNT5A, CDKN2B, GDF5, SOX9, CDKN1C, HRSP12, PTEN, TGFB2, CDK6, TGFBR3, PPARD, MEF2C, DLG1, PTCH1, RUNX3, RGN, SFRP1, MARVELD3, IFT74, IFT122, WFDC1

GO:0050681

MF

androgen receptor binding

Interacting selectively and non-covalently with an androgen receptor.

TGFB1I1, TCF21, KDM1A, PRKCB, RB1, DDX5, CALR, CTNNB1, BRCA1, NRIP1, CDK7, SMARCA4, EP300, NCOA4, NCOA1, PKN1, WIPI1, FOXP1, PPARGC1A, RNF14, RNF6, NCOA3

GO:0050682

MF

AF-2 domain binding

Interacting selectively and non-covalently with the AF-2 domain of a protein, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation.

PPARGC1B

GO:0050683

MF

AF-1 domain binding

Interacting selectively and non-covalently with the AF-1 domain of a protein, a ligand-independent transactivation domain which is required for the full transcriptional activity of the receptor.

HEYL

GO:0050684

BP

regulation of mRNA processing

Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide.

CDK11B, SUPT6H, SRPK1, SLTM, CDK11A

GO:0050687

BP

negative regulation of defense response to virus

Any process that stops, prevents or reduces the rate or extent of antiviral mechanisms, thereby facilitating viral replication.

TRIM38, PPM1B, C1QBP, HTRA1, ITCH

GO:0050689

BP

negative regulation of defense response to virus by host

Any host process that results in the inhibition of antiviral immune response mechanisms, thereby facilitating viral replication. The host is defined as the larger of the organisms involved in a symbiotic interaction.

MICB

GO:0050690

BP

regulation of defense response to virus by virus

Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism.

AP2A2, CD4, FYN, CD28, AP2S1, AP1S2, B2M, AP1S1, RAC1, AP2B1, ARF1, AP1B1, PAK2, ELMO1, DOCK2, AP2M1, ATP6V1H

GO:0050691

BP

regulation of defense response to virus by host

Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism.

TNFAIP3, RNF216

GO:0050692

MF

DBD domain binding

Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors.

PROX1

GO:0050693

MF

LBD domain binding

Interacting selectively and non-covalently with the LBD, the ligand binding domain found in nuclear receptors. In general, the LBDs consist of three layers comprised of twelve alpha-helices and several beta-strands that are organized around a lipophilic ligand-binding pocket.

PROX1, CITED1, CITED2

GO:0050699

MF

WW domain binding

Interacting selectively and non-covalently with a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions.

CDC25C, SCNN1A, SCNN1G, TNK2, TCEAL1, ENAH, TCEAL3, PMEPA1, TCEAL4, KIF20B, LITAF, NDFIP2

GO:0050700

MF

CARD domain binding

Interacting selectively and non-covalently with a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family.

RIPK2, MAVS, CARD19

GO:0050702

BP

interleukin-1 beta secretion

The regulated release of interleukin 1 beta from a cell.

TLR4, ABCA1, CD36, F2RL1

GO:0050703

BP

interleukin-1 alpha secretion

The regulated release of interleukin-1 alpha from a cell.

S100A13

GO:0050706

BP

regulation of interleukin-1 beta secretion

Any process that modulates the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell.

FOXP1

GO:0050707

BP

regulation of cytokine secretion

Any process that modulates the frequency, rate or extent of the regulated release of cytokines from a cell.

TLR4, SOCS1, TLR5, TLR2, LYN, TLR1, GPAM

GO:0050708

BP

regulation of protein secretion

Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell.

INS, SAA1, PAM, ARFIP1, STXBP5, PIK3C3, RHBDF1, DNAJC1, STXBP5L

GO:0050709

BP

negative regulation of protein secretion

Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell.

INS, DRD2, ERP29, RHBDF1, DPH3

GO:0050710

BP

negative regulation of cytokine secretion

Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cytokines from a cell.

IL6, SRGN, TNFSF4, PTGER4, BTN2A2, LGR4, FOXP3, RGCC

GO:0050711

BP

negative regulation of interleukin-1 secretion

Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of interleukin-1 from a cell.

GAS6

GO:0050712

BP

negative regulation of interleukin-1 alpha secretion

Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell.

IL1R2

GO:0050713

BP

negative regulation of interleukin-1 beta secretion

Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell.

APOA1

GO:0050714

BP

positive regulation of protein secretion

Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell.

APBB1, TGFB1, IL1A, FGA, FGB, FGG, ANG, IGF1, EZR, BMP6, VEGFC, TGFB2, PPIA, ADAM8, ARF1, PPID, ADAM9, ANKRD1, EXPH5, SYTL4, ATP13A2, EXOC1, RPH3AL, STXBP5L

GO:0050715

BP

positive regulation of cytokine secretion

Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell.

INS, TNF, IL1A, CD14, FGR, SAA1, MIF, IL10, PTGER4, HTR2B, SYK, AGTR2, GLMN, C1QTNF3, CADM1, RGCC

GO:0050716

BP

positive regulation of interleukin-1 secretion

Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 from a cell.

HMGB1, SAA1

GO:0050717

BP

positive regulation of interleukin-1 alpha secretion

Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell.

CASP1, PANX1

GO:0050718

BP

positive regulation of interleukin-1 beta secretion

Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell.

CCL3, IFNAR1, CASP1, WNT5A, PANX1, PYCARD

GO:0050725

BP

positive regulation of interleukin-1 beta biosynthetic process

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 beta.

EGR1

GO:0050726

BP

positive regulation of interleukin-1 alpha biosynthetic process

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 alpha.

CCL20

GO:0050727

BP

regulation of inflammatory response

Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents.

JAK2, BRD4, SEMA7A, AHSG, ESR1, ANXA1, LYN, IL1R1, SELE, TNFAIP3, TNFSF4, AGTR1, PTGS2, BCL6, CASP4, SLC7A2, ADAMTS12, XIAP, RELA, MTA1, BIRC3, NR1D2, ZYX, DUOXA1, DUOXA2, RICTOR, SETD6, PGLYRP2, MGLL, FANCD2, FOXP1, TBC1D23, SHPK, PYCARD

GO:0050728

BP

negative regulation of inflammatory response

Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.

SOCS3, KLF4, SOCS5, ADA, APOA1, APOE, KRT1, SAA1, BCR, HGF, ETS1, PTPN2, NFKB1, TNFRSF1B, TNFAIP3, NT5E, RORA, PTGER4, CHRNA7, SERPINF1, SMAD3, TNFAIP6, TEK, PPARD, MVK, PRKCD, TYRO3, PPARA, ABR, NR1H3, MAPK7, ADIPOQ, PTGIS, CD276, GHSR, PBK, NR1H4, GPER1, VIMP, FEM1A, NDFIP1, C1QTNF3, WFDC1, MMP26, GHRL, RABGEF1

GO:0050729

BP

positive regulation of inflammatory response

Any process that activates or increases the frequency, rate or extent of the inflammatory response.

TLR4, MAPK13, TLR3, TLR2, JAK2, IL33, EGFR, AGT, LDLR, S100A8, SERPINE1, S100A9, LPL, CCL3, HSPD1, CCL4, CCL2, CCL5, PLA2G2A, ETS1, FABP4, ITGA2, ZP3, TGM2, TNFSF4, AGTR1, PTGER4, WNT5A, STAT5B, CCL8, IL1RL1, CD47, HYAL2, PLA2G7, IL18, CDK19, TRPV4, IL17RB, GPRC5B

GO:0050730

BP

regulation of peptidyl-tyrosine phosphorylation

Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.

EGFR, PDGFA, ITGB2, IFNAR1, EFNA1, PPP2R5B, PDGFD, PDCL3, PDGFC

GO:0050731

BP

positive regulation of peptidyl-tyrosine phosphorylation

Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.

HAX1, PLPP3, NRP1, RIPK2, JAK2, AGT, PDGFB, TGFB1, GH1, INS, IGF2, CD4, VTN, CD74, TP53, IGF1, ITGB3, IL6, ICAM1, CCK, ITGA5, IL6R, GHR, TDGF1, MIF, HGF, HCLS1, LIF, VEGFA, CD44, CD36, IL11, EFNA1, KITLG, FGF7, THBS4, SYK, VEGFC, EFNA5, CD81, NRG1, TNK2, CNTN1, PAK2, ENPP2, ANGPT1, STK11, ADIPOQ, RICTOR, CSPG4, ARHGEF2, MLST8, EHD4

GO:0050732

BP

negative regulation of peptidyl-tyrosine phosphorylation

Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.

SPINK1, PRKCD, SFRP1, SAMSN1

GO:0050733

MF

RS domain binding

Interacting selectively and non-covalently with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing.

SRSF10, SON, SRSF1, SRSF5, LUC7L

GO:0050746

BP

regulation of lipoprotein metabolic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.

DGAT2, LIPG

GO:0050747

BP

positive regulation of lipoprotein metabolic process

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.

PEMT

GO:0050748

BP

negative regulation of lipoprotein metabolic process

Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.

ITGB3, ITGAV

GO:0050750

MF

low-density lipoprotein particle receptor binding

Interacting selectively and non-covalently with a low-density lipoprotein receptor.

DKK1, APOE, CRP, APOB, HSP90B1, SYT1, LRPAP1, DNAJA1, LDLRAP1, APOA5, PCSK9, AP2M1

GO:0050755

BP

chemokine metabolic process

The chemical reactions and pathways involving chemokines, any member of a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.

TREM1

GO:0050760

BP

negative regulation of thymidylate synthase biosynthetic process

Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.

APBB1

GO:0050764

BP

regulation of phagocytosis

Any process that modulates the frequency, rate or extent of phagocytosis, the process in which phagocytes engulf external particulate material.

ITGAV, FGR, SYK, SCARB1

GO:0050765

BP

negative regulation of phagocytosis

Any process that stops, prevents, or reduces the frequency, rate or extent of phagocytosis.

SNX3, TGFB1, CSK, PTEN, RACK1, ADIPOQ, SYT11

GO:0050766

BP

positive regulation of phagocytosis

Any process that activates or increases the frequency, rate or extent of phagocytosis.

TNF, IL1B, AHSG, MBL2, BCR, PTX3, CALR, SLC11A1, RAB27A, RAP1A, CD47, MERTK, ABR, GAS6, CAMK1D, DOCK2, PYCARD

GO:0050767

BP

regulation of neurogenesis

Any process that modulates the frequency, rate or extent of neurogenesis, the origin and formation of neurons.

ARNTL, HMGB2, CTNNB1, BCL6, YAP1, DOCK7, DLL4, CHD7

GO:0050768

BP

negative regulation of neurogenesis

Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons.

BRINP1, BMPR1A, NOTCH1, DYNLT1, PCM1, HOOK3, SORL1, ARHGEF2

GO:0050769

BP

positive regulation of neurogenesis

Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons.

WNT2, XRCC5, SERPINF1, STAR, NUMB, SPEN, GPER1, ZNF335

GO:0050770

BP

regulation of axonogenesis

Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron.

CHN1, EFNA1, EPHA4, SSH2, SSH3, KIF13B

GO:0050771

BP

negative regulation of axonogenesis

Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis.

DAB1, NGFR, MAG, EPHB2, GDI1, PSEN1, ARHGDIA, PTEN, RHOA, PTK2, RUFY3, SYNGAP1, RTN4

GO:0050772

BP

positive regulation of axonogenesis

Any process that activates or increases the frequency, rate or extent of axonogenesis.

PLXNB2, SHOX2, SLIT2, NGF, NGFR, SKIL, ARHGDIA, RHOA, MAP2K1, TIAM1, STK11, NTRK2, ROBO2

GO:0050773

BP

regulation of dendrite development

Any process that modulates the frequency, rate or extent of dendrite development.

CDC20, DBN1, CAMK1D, RTN4IP1

GO:0050774

BP

negative regulation of dendrite morphogenesis

Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite morphogenesis.

ID1, YWHAH, PPP3CA, NFATC4, TRPC6

GO:0050775

BP

positive regulation of dendrite morphogenesis

Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis.

OBSL1, PTPRD, VAMP7, EPHA4, ILK, CUX1, CAPRIN1, CUL7, ANKRD27, RAB21

GO:0050776

BP

regulation of immune response

Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.

TYROBP, C3, HLA-B, COL1A1, COL3A1, ITGB2, ICAM1, ITGB1, COL1A2, FCGR1A, IFITM1, HLA-E, SELL, PVR, CD1D, HLA-G, VCAM1, CD33, KLRC1, CD40LG, HLA-A, HLA-F, FCGR2B, BCL6, CD200, KIR3DL2, CD81, B2M, CXADR, SMAD3, MICB, MICA, CD276, LAIR1, LAIR2, LILRB1, SPPL2A, CLEC2B, ULBP3, TREM1, COL17A1, SIGLEC7

GO:0050777

BP

negative regulation of immune response

Any process that stops, prevents, or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.

COL3A1, AMBP, LYN, HLA-G, TGFB2, INPP5D, FOXP3

GO:0050778

BP

positive regulation of immune response

Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.

TGFB2

GO:0050779

BP

RNA destabilization

Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes.

DXO, TNFRSF1B

GO:0050780

MF

dopamine receptor binding

Interacting selectively and non-covalently with a dopamine receptor.

CLIC6

GO:0050786

MF

RAGE receptor binding

Interacting selectively and non-covalently with the RAGE receptor, the receptor for advanced glycation end-products.

S100B, S100A8, S100A9, HMGB1, FPR1, S100P, S100A4, HMGB2, S100A7, S100A13

GO:0050790

BP

regulation of catalytic activity

Any process that modulates the activity of an enzyme.

KRIT1, ZEB2, BAG2, CTSB, AR, CAPN3, BRCC3, RCAN1, GPSM2, RING1, DMPK, SEPT2, PPP1R7, PPP1R3B, ANKLE2, GPSM1, PCP2, TTN, MTMR9, GRPEL1, GOPC, BMP2K, MAT2B, SH3BP4, ATP6V1H, GPSM3

GO:0050792

BP

regulation of viral process

Any process that modulates the rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts.

CHMP2A, VPS4B, CHMP4B

GO:0050793

BP

regulation of developmental process

Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

NOTCH2

GO:0050794

BP

regulation of cellular process

Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

WNK1

GO:0050795

BP

regulation of behavior

Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.

MDK, HTR2B, HOXA1, AHI1

GO:0050796

BP

regulation of insulin secretion

Any process that modulates the frequency, rate or extent of the regulated release of insulin.

ARNTL, ENSA, GCG, TNF, IL1B, SLC25A5, SLC2A1, SLC25A4, CCL5, PRKCA, CNR1, MARCKS, SSTR5, LEP, MTNR1B, CPT1A, SNAP25, RAP1A, ICA1, CACNA1C, ITPR2, ITPR3, ITPR1, KCNJ11, CACNA1E, CARTPT, RAPGEF4, UQCC2

GO:0050798

BP

activated T cell proliferation

The expansion of a T cell population following activation by an antigenic stimulus.

FYN, SATB1

GO:0050801

BP

ion homeostasis

Any process involved in the maintenance of an internal steady state of ions within an organism or cell.

KLHL3

GO:0050803

BP

regulation of synapse structure or activity

Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).

APP, PPT1, SYNGAP1

GO:0050804

BP

modulation of synaptic transmission

Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.

CSPG5, PRKACA, HRH1, PPP3CA, EIF4EBP2, PXK, BTBD9

GO:0050805

BP

negative regulation of synaptic transmission

Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.

PCDH17, GNAI2, GNAI1, ADIPOQ, TNR

GO:0050806

BP

positive regulation of synaptic transmission

Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.

CLSTN1, CCL2, SYT1, SLC1A3, NMU, DLG4, KISS1, CLSTN2, RETN

GO:0050807

BP

regulation of synapse organization

Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).

DKK1, IL10, ETV5

GO:0050808

BP

synapse organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).

SEMA3E, PAK3, CTNNB1, SNCA, LRRTM4, NLGN4X, SLC9A6, TNR, RAB39B, PCDHGC3, MYO5A

GO:0050810

BP

regulation of steroid biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.

DHH, TSPO, LEP, IGFBP7, DDX20

GO:0050811

MF

GABA receptor binding

Interacting selectively and non-covalently with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor.

TRAK2, GABRA5, GABARAPL2, PLCL1, GABARAPL1, PLCL2, TRAK1, ARFGEF2

GO:0050812

BP

regulation of acyl-CoA biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA.

SNCA

GO:0050815

MF

phosphoserine binding

Interacting selectively and non-covalently with a phosphorylated serine residue within a protein.

YWHAB, YWHAE

GO:0050819

BP

negative regulation of coagulation

Any process that stops, prevents, or reduces the frequency, rate or extent of coagulation.

ANXA5, PROCR

GO:0050820

BP

positive regulation of coagulation

Any process that activates or increases the frequency, rate or extent of coagulation.

PSEN1

GO:0050821

BP

protein stabilization

Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.

USP27X, PLPP3, SMAD7, MDM4, ZNF207, PARK2, CREBL2, USP2, CRTAP, WIZ, APOA1, GAPDH, IGF1, ATP1B1, PFN1, HSP90AA1, HSP90AB1, HSPA1A, HSPA1B, HSPD1, CLU, LAMP1, LAMP2, CREB1, TCP1, FLNA, PPIB, MT3, CALR, PIK3R1, PHB, CDKN1A, CCT6A, CCT3, GNAQ, CCT8, ATP1B3, PTEN, STXBP1, UBE2B, CCT2, SMAD3, ANK2, PRKCD, SOX4, EP300, STK4, MORC3, CDC37, AAK1, TBRG1, SYVN1, USP13, ZBED3, PHB2, CHP1, CCT7, PDCD10, NAA15, PINK1, SOX17, TAF9B, IFT46, HPS4, GTSE1, NLK, PPARGC1A, SEL1L

GO:0050829

BP

defense response to Gram-negative bacterium

Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism.

TLR4, TLR5, LYZL6, CD4, APP, SERPINE1, IL6, IL6R, DEFA4, HMGB2, S100A7, ADM, SLC11A1, LYZ, B2M, FCN2, MR1, OPTN, PYCARD

GO:0050830

BP

defense response to Gram-positive bacterium

Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.

RIPK2, TLR2, HIST1H2BK, LYZL6, TNF, CRP, ANG, APP, IL6, FGR, MBL2, DEFA4, HLA-E, PLA2G2A, CD36, C5AR1, HMGB2, IL12A, ADM, TIRAP, LYZ, B2M, HIST1H2BC, ADAM17, FCN2, HIST2H2BE, SEH1L, PGLYRP2, TBK1

GO:0050832

BP

defense response to fungus

Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

S100A8, MPO, S100A9, DEFA4, HAMP, COTL1, SPON2

GO:0050833

MF

pyruvate transmembrane transporter activity

Enables the transfer of pyruvate, 2-oxopropanoate, from one side of the membrane to the other.

SLC16A7

GO:0050839

MF

cell adhesion molecule binding

Interacting selectively and non-covalently with a cell adhesion molecule.

FGA, FGB, FGG, ITGB3, ITGB2, ITGB1, SELL, JUP, PVR, EZR, CD1D, DSP, CPE, VCAM1, PTPRD, CD200, CXADR, ADAM8, PTPN11, SMAGP, DSG2, POSTN, NECTIN1, TENM4, NLGN4X, NLGN1, CADM1, CDHR2, NECTIN3, TENM3, NRXN1, PKP3

GO:0050840

MF

extracellular matrix binding

Interacting selectively and non-covalently with a component of the extracellular matrix.

CYR61, VTN, ITGB3, ITGAV, DCN, SPARC, SPP1, COL11A1, VEGFA, BGN, FBLN2, SPARCL1, TGFBI, OLFML2A, GPR126, ADAMTS15, SPOCK2, CD248, ADAMTS5, ADGRG1

GO:0050847

BP

progesterone receptor signaling pathway

Any series of molecular signals generated as a consequence of a progesterone binding to its receptor.

UBR5, PHB

GO:0050848

BP

regulation of calcium-mediated signaling

Any process that modulates the frequency, rate or extent of calcium-mediated signaling, the process in which a cell uses calcium ions to convert an extracellular signal into a response.

GBP1, RGN

GO:0050849

BP

negative regulation of calcium-mediated signaling

Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-mediated signaling.

ITPR1

GO:0050850

BP

positive regulation of calcium-mediated signaling

Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling.

ADA, CD4, CCL3, CCL4, SYK, HINT1, CDH13, P2RX4

GO:0050851

BP

antigen receptor-mediated signaling pathway

A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell.

RFTN2

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