Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0045956

BP

positive regulation of calcium ion-dependent exocytosis

Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis.

CACNA1G, SYT1, STXBP1, ARF1, CDK5

GO:0045957

BP

negative regulation of complement activation, alternative pathway

Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway.

CR1

GO:0045959

BP

negative regulation of complement activation, classical pathway

Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway.

CR1

GO:0045963

BP

negative regulation of dopamine metabolic process

Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving dopamine.

COMT, SNCA

GO:0045964

BP

positive regulation of dopamine metabolic process

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine.

GPR37, MAOB, ABAT

GO:0045976

BP

negative regulation of mitotic cell cycle, embryonic

Any process that stops, prevents or reduces the rate or extent of progression through the embryonic mitotic cell cycle.

CTNNB1

GO:0045977

BP

positive regulation of mitotic cell cycle, embryonic

Any process that activates or increases the frequency, rate or extent of progression through the embryonic mitotic cell cycle.

HES1

GO:0045986

BP

negative regulation of smooth muscle contraction

Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction.

ADRB2, PTGS2

GO:0045987

BP

positive regulation of smooth muscle contraction

Any process that activates or increases the frequency, rate or extent of smooth muscle contraction.

ADA, EDN1, ITGA2, CHRM3, EDN2, ADRA1D, F2R, ADRA1A, PTGS2, ADRA1B, NMU, NPY2R, CTTN, SPHK1

GO:0045988

BP

negative regulation of striated muscle contraction

Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction.

ATP1A2

GO:0045994

BP

positive regulation of translational initiation by iron

Any process involving iron that activates or increases the rate of translational initiation.

TNF

GO:0045995

BP

regulation of embryonic development

Any process that modulates the frequency, rate or extent of embryonic development.

INSR, CDK1, LAMA2, LAMA4, LAMA3, PHLDA2, NIPBL, SOX17, NOCT

GO:0046005

BP

positive regulation of circadian sleep/wake cycle, REM sleep

Any process that activates or increases the duration or quality of rapid eye movement (REM) sleep.

GHRH

GO:0046007

BP

negative regulation of activated T cell proliferation

Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation.

PRNP, PRKAR1A, BTN2A2, FOXP3

GO:0046010

BP

positive regulation of circadian sleep/wake cycle, non-REM sleep

Any process that activates or increases the duration or quality of non-rapid eye movement (NREM) sleep.

NPY2R, GHRL

GO:0046022

BP

positive regulation of transcription from RNA polymerase II promoter during mitosis

Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis.

ZNF268

GO:0046030

MF

inositol trisphosphate phosphatase activity

Catalysis of the reaction: myo-inositol trisphosphate + H2O = myo-inositol bisphosphate + phosphate.

INPP5K

GO:0046031

BP

ADP metabolic process

The chemical reactions and pathways involving ADP, adenosine 5'-diphosphate.

AMPD3, BAD

GO:0046032

BP

ADP catabolic process

The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.

NUDT9

GO:0046033

BP

AMP metabolic process

The chemical reactions and pathways involving AMP, adenosine monophosphate.

AK1, AK4, AK3

GO:0046034

BP

ATP metabolic process

The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.

AK1, ATP1B1, HSPA1A, HSPA1B, ATP6V1B2, AK4, NDUFS1, ATP1A2, VCP, AMPD3, GUK1, BAD, MYH4

GO:0046037

BP

GMP metabolic process

The chemical reactions and pathways involving GMP, guanosine monophosphate.

CASK, DLG4, MPP1, DLG1, GUK1, TJP2

GO:0046039

BP

GTP metabolic process

The chemical reactions and pathways involving GTP, guanosine triphosphate.

GNAI3, RHOQ, AK4, AMPD3, AK3

GO:0046040

BP

IMP metabolic process

The chemical reactions and pathways involving IMP, inosine monophosphate.

ADSS, ADSSL1

GO:0046041

BP

ITP metabolic process

The chemical reactions and pathways involving ITP, inosine triphosphate.

AK3

GO:0046051

BP

UTP metabolic process

The chemical reactions and pathways involving UTP, uridine (5'-)triphosphate.

AK3

GO:0046054

BP

dGMP metabolic process

The chemical reactions and pathways involving dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).

GUK1

GO:0046058

BP

cAMP metabolic process

The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).

PTH, PTHLH

GO:0046060

BP

dATP metabolic process

The chemical reactions and pathways involving dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).

GUK1

GO:0046061

BP

dATP catabolic process

The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).

ADA, NUDT1, SAMHD1

GO:0046068

BP

cGMP metabolic process

The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate.

PDE9A, RORA

GO:0046069

BP

cGMP catabolic process

The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate.

PDE5A, PDE9A

GO:0046070

BP

dGTP metabolic process

The chemical reactions and pathways involving dGTP, guanosine triphosphate.

DGUOK

GO:0046078

BP

dUMP metabolic process

The chemical reactions and pathways involving dUMP, deoxyuridine (5'-)monophosphate (2'-deoxyuridine 5'-phosphate).

TYMS

GO:0046081

BP

dUTP catabolic process

The chemical reactions and pathways resulting in the breakdown of dUTP, deoxyuridine (5'-)triphosphate.

DUT

GO:0046084

BP

adenine biosynthetic process

The chemical reactions and pathways resulting in the formation of adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine.

PAICS

GO:0046085

BP

adenosine metabolic process

The chemical reactions and pathways involving adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.

ACPP, PTGDR

GO:0046086

BP

adenosine biosynthetic process

The chemical reactions and pathways resulting in the formation of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.

NT5E

GO:0046092

BP

deoxycytidine metabolic process

The chemical reactions and pathways involving deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.

TK2

GO:0046098

BP

guanine metabolic process

The chemical reactions and pathways involving guanine, 2-amino-6-hydroxypurine, a purine that is one of the five main bases found in nucleic acids and a component of a number of phosphorylated guanosine derivatives whose metabolic or regulatory functions are important.

KDM1A

GO:0046101

BP

hypoxanthine biosynthetic process

The chemical reactions and pathways resulting in the formation of hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate.

PRPS1

GO:0046103

BP

inosine biosynthetic process

The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.

ADA

GO:0046104

BP

thymidine metabolic process

The chemical reactions and pathways involving thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA.

TK2, TK1

GO:0046108

BP

uridine metabolic process

The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.

UPP2

GO:0046111

BP

xanthine biosynthetic process

The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.

ADA

GO:0046121

BP

deoxyribonucleoside catabolic process

The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).

DERA

GO:0046122

BP

purine deoxyribonucleoside metabolic process

The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).

DGUOK

GO:0046130

BP

purine ribonucleoside catabolic process

The chemical reactions and pathways resulting in the breakdown of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.

ENPP4

GO:0046134

BP

pyrimidine nucleoside biosynthetic process

The chemical reactions and pathways resulting in the formation of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).

TYMS, UMPS, CAD, DCTD, DUT, DHODH

GO:0046135

BP

pyrimidine nucleoside catabolic process

The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).

UPP2, TYMP, NT5E, DPYD, UPP1, NT5C

GO:0046166

BP

glyceraldehyde-3-phosphate biosynthetic process

The chemical reactions and pathways resulting in the formation of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.

TKT, TPI1

GO:0046167

BP

glycerol-3-phosphate biosynthetic process

The chemical reactions and pathways resulting in the formation of glycerol-3-phosphate, a phosphoric monoester of glycerol.

GK

GO:0046177

BP

D-gluconate catabolic process

The chemical reactions and pathways resulting in the breakdown of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.

IDNK

GO:0046185

BP

aldehyde catabolic process

The chemical reactions and pathways resulting in the breakdown of aldehydes, any organic compound with the formula R-CH=O.

GPI

GO:0046204

BP

nor-spermidine metabolic process

The chemical reactions and pathways involving nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.

SAT1, SAT2

GO:0046208

BP

spermine catabolic process

The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.

SAT1, SAT2

GO:0046209

BP

nitric oxide metabolic process

The chemical reactions and pathways involving nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.

TLR2

GO:0046219

BP

indolalkylamine biosynthetic process

The chemical reactions and pathways resulting in the formation of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.

TPH2

GO:0046226

BP

coumarin catabolic process

The chemical reactions and pathways resulting in the breakdown of coumarins, compounds derived from the phenylacrylic skeleton of cinnamic acids.

CYP2A6

GO:0046316

MF

gluconokinase activity

Catalysis of the reaction: D-gluconate + ATP = 6-phospho-D-gluconate + ADP + 2 H(+).

IDNK

GO:0046320

BP

regulation of fatty acid oxidation

Any process that modulates the frequency, rate or extent of fatty acid oxidation.

FABP3, PDK4

GO:0046321

BP

positive regulation of fatty acid oxidation

Any process that activates or increases the frequency, rate or extent of fatty acid oxidation.

PPARG, PPARA, NR4A3, PPARGC1A

GO:0046322

BP

negative regulation of fatty acid oxidation

Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid oxidation.

ACADVL, DGAT2

GO:0046323

BP

glucose import

The directed movement of the hexose monosaccharide glucose into a cell or organelle.

SLC2A10, SLC2A4, HNF1A, SESN2, RAB4B, SLC2A6

GO:0046324

BP

regulation of glucose import

Any process that modulates the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.

ASPSCR1

GO:0046325

BP

negative regulation of glucose import

Any process that stops, prevents, or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.

TNF, ENPP1, LEP, GRB10, PEA15, VIMP, LMBRD1

GO:0046326

BP

positive regulation of glucose import

Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.

CREBL2, FGF19, PTH, INS, IGF1, INSR, RHOQ, PIK3R1, AKT1, AKT2, IRS1, PRKCI, SLC1A2, ARPP19, RAP1A, ADIPOQ, MAPK14, ADIPOR2, ITLN1, SORBS1, CAPN10, IRS2

GO:0046327

BP

glycerol biosynthetic process from pyruvate

The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate.

PCK1

GO:0046328

BP

regulation of JNK cascade

Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade.

MAP4K4, IGF1R, RAP2A, EPHB1, F2RL1, MAPK8IP2, ULK4, MAPK8IP3, MAPK8IP1

GO:0046329

BP

negative regulation of JNK cascade

Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.

HDAC3, PER1, PARK2, NCOR1, AMBP, AKT1, DUSP3, F2RL1, GPS2, ZMYND11, ZNF675, DUSP19, MARVELD3, ITCH, PINK1, TAOK3, DACT1

GO:0046330

BP

positive regulation of JNK cascade

Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade.

TLR4, SDCBP, AXIN1, TLR3, RIPK2, FZD7, GADD45B, GADD45G, FGF19, IL1A, IL1B, HMGB1, GADD45A, CD27, CTGF, FLT4, LTBR, F2RL1, TIRAP, CDC42, RIPK1, TPD52L1, MINK1, RB1CC1, DUSP19, MAP3K5, TAOK3, HIPK2, TRPV4, PLCB1, DUSP22, TNFRSF19, TAOK2, PYCARD

GO:0046331

BP

lateral inhibition

Signaling between cells of equivalent developmental potential that results in these cells adopting different developmental fates. An example is the suppression by cells with a particular fate of the adoption of the same fate by surrounding cells.

HES1

GO:0046332

MF

SMAD binding

Interacting selectively and non-covalently with a SMAD signaling protein.

AXIN1, COL3A1, COL5A2, COL1A2, BMP2, SKI, SKIL, FLNA, YY1, CTNNB1, BMPR1A, ACVR1B, TGFBR1, TGFBR2, HMGA2, DAB2, PURA, MEF2A, TGFBR3, ACVR1, SMAD2, RNF111, MAGI2, EID2, PURB, TCF12, HIPK2, SMURF2, STUB1, USP15

GO:0046338

BP

phosphatidylethanolamine catabolic process

The chemical reactions and pathways resulting in the breakdown of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.

PNPLA8

GO:0046339

BP

diacylglycerol metabolic process

The chemical reactions and pathways involving diacylglycerol, a glyceride in which any two of the R groups (positions not specified) are acyl groups while the remaining R group can be either H or an alkyl group.

DGKZ, PGS1, DGKK, GPAT4, DGAT2

GO:0046340

BP

diacylglycerol catabolic process

The chemical reactions and pathways resulting in the breakdown of diacylglycerol, a glyceride in which any two of the R groups (positions not specified) are acyl groups while the remaining R group can be either H or an alkyl group.

APOA2, LIPE

GO:0046356

BP

acetyl-CoA catabolic process

The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.

NUDT7

GO:0046360

BP

2-oxobutyrate biosynthetic process

The chemical reactions and pathways resulting in the formation of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.

THNSL2

GO:0046368

BP

GDP-L-fucose metabolic process

The chemical reactions and pathways involving GDP-L-fucose, a substance composed of L-fucose in glycosidic linkage with guanosine diphosphate.

FUT8

GO:0046370

BP

fructose biosynthetic process

The chemical reactions and pathways resulting in the formation of fructose, the ketohexose arabino-2-hexulose.

AKR1B1, SORD

GO:0046386

BP

deoxyribose phosphate catabolic process

The chemical reactions and pathways resulting in the breakdown of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.

PGM2, DERA

GO:0046390

BP

ribose phosphate biosynthetic process

The chemical reactions and pathways resulting in the formation of ribose phosphate, any phosphorylated ribose sugar.

G6PD

GO:0046395

BP

carboxylic acid catabolic process

The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.

PON1

GO:0046398

BP

UDP-glucuronate metabolic process

The chemical reactions and pathways involving UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.

CSGALNACT1

GO:0046415

BP

urate metabolic process

The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals.

G6PC, LRRC16A, SLC16A9

GO:0046425

BP

regulation of JAK-STAT cascade

Any process that modulates the frequency, rate or extent of the JAK-STAT signaling pathway.

PIGU

GO:0046426

BP

negative regulation of JAK-STAT cascade

Any process that stops, prevents, or reduces the frequency, rate or extent of the JAK-STAT signaling pathway activity.

SOCS2, SOCS3, SOCS6, LEPROT, SOCS1, FLRT2, SOCS5, DAB1, DCN, BGN, NF2, CAV1, PODN, RTN4RL1, LRRTM4, ADIPOR1, LRRC19, FLRT3, FLRT1

GO:0046427

BP

positive regulation of JAK-STAT cascade

Any process that activates or increases the frequency, rate or extent of the JAK-STAT signaling pathway activity.

PRL, GH1, IL6, KIT, CCL5, AKR1B1, IL10, F2R, LEP, NOTCH1, HES1, CYP1B1, CRLF3, ADIPOR1

GO:0046434

BP

organophosphate catabolic process

The chemical reactions and pathways resulting in the breakdown of organophosphates, any phosphate-containing organic compound.

PON1

GO:0046449

BP

creatinine metabolic process

The chemical reactions and pathways involving creatinine, 2-amino-1,5-dihydro-1-methyl-4H-imidazol-4-one, an end product of creatine metabolism and a normal constituent of urine.

MME, GHR, STAT5A, STAT5B

GO:0046452

BP

dihydrofolate metabolic process

The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.

DHFR

GO:0046456

BP

icosanoid biosynthetic process

The chemical reactions and pathways resulting in the formation of icosanoids, any of a group of C20 polyunsaturated fatty acids.

FADS1, PLA2G4A

GO:0046459

BP

short-chain fatty acid metabolic process

The chemical reactions and pathways involving fatty acids with a chain length of less than C6.

ACOT4

GO:0046464

BP

acylglycerol catabolic process

The chemical reactions and pathways resulting in the breakdown of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.

ABHD12, MGLL, ABHD6

GO:0046466

BP

membrane lipid catabolic process

The chemical reactions and pathways resulting in the breakdown of membrane lipids, any lipid found in or associated with a biological membrane.

CYP1B1

GO:0046469

BP

platelet activating factor metabolic process

The chemical reactions and pathways involving platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.

PLA2G7

GO:0046470

BP

phosphatidylcholine metabolic process

The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes.

PON1, GPLD1, APOA5

GO:0046473

BP

phosphatidic acid metabolic process

The chemical reactions and pathways involving phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.

PLA2G2A

GO:0046474

BP

glycerophospholipid biosynthetic process

The chemical reactions and pathways resulting in the formation of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.

AJUBA

GO:0046475

BP

glycerophospholipid catabolic process

The chemical reactions and pathways resulting in the breakdown of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.

ABHD12, SMPD4, GDE1, PLA2G4C

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