Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0009247

BP

glycolipid biosynthetic process

The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).

ST8SIA6, B3GNT5

GO:0009249

BP

protein lipoylation

The addition of a lipoyl group to an amino acid residue in a protein.

NDUFAB1, POP5, LIPT1

GO:0009253

BP

peptidoglycan catabolic process

The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.

LYG2, PGLYRP2

GO:0009256

BP

10-formyltetrahydrofolate metabolic process

The chemical reactions and pathways involving 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.

MTHFD2L

GO:0009257

BP

10-formyltetrahydrofolate biosynthetic process

The chemical reactions and pathways resulting in the formation of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.

MTHFD1

GO:0009258

BP

10-formyltetrahydrofolate catabolic process

The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.

ALDH1L1, ALDH1L2

GO:0009259

BP

ribonucleotide metabolic process

The chemical reactions and pathways involving a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

RNASEH2B

GO:0009263

BP

deoxyribonucleotide biosynthetic process

The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

RRM1, RRM2

GO:0009264

BP

deoxyribonucleotide catabolic process

The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

DERA

GO:0009266

BP

response to temperature stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.

ERO1A, GLRX2, TRPV2

GO:0009267

BP

cellular response to starvation

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment.

FADS1, ALB, INHBB, RALB, SRD5A1, SREBF1, AKR1C3, DSC2, SREBF2, FOXO1, KLF10, BMPR2, GAS6, CARTPT, PDK4, KIAA1324, SFRP1, PCSK9, FBXO22, FNIP1, WNT2B, EHMT2, ZFYVE1, RRAGD, DNAJC15

GO:0009268

BP

response to pH

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.

CA2, ARSB, GJA1, PAM, CLCN7

GO:0009279

CC

cell outer membrane

A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.

SLC11A1, DAG1

GO:0009298

BP

GDP-mannose biosynthetic process

The chemical reactions and pathways resulting in the formation of GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.

PMM2, GMPPB

GO:0009299

BP

mRNA transcription

The cellular synthesis of messenger RNA (mRNA) from a DNA template.

EREG, DDX5, HSF1, PPARD

GO:0009301

BP

snRNA transcription

The synthesis of small nuclear RNA (snRNA) from a DNA template.

SNAPC3

GO:0009303

BP

rRNA transcription

The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template.

CD3EAP, NPM3, ANG, RNASEK, GTF3A, NIFK, POLR1E, SPIN1

GO:0009306

BP

protein secretion

The controlled release of proteins from a cell.

FGG, SCG2, PDIA4, CBLN1, CANX, ERP29, ARL4D, RAB8B, NECAB3, LMF1, ARFGAP3, CBLN4, SEL1L

GO:0009308

BP

amine metabolic process

The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.

AOC2, CYP1A1, VCAM1, AOC3

GO:0009311

BP

oligosaccharide metabolic process

The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.

ST6GAL1, ST8SIA6, MGAT2, ST3GAL1, ST3GAL3, ST3GAL4, ST3GAL2, ST8SIA4, ST6GAL2, ST6GALNAC5, ST6GALNAC4, ST6GALNAC2, MAN1B1, ST3GAL6

GO:0009312

BP

oligosaccharide biosynthetic process

The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.

B3GALT2, MPDU1, B4GALT1, MGAT2, ST6GALNAC5, FUT8

GO:0009313

BP

oligosaccharide catabolic process

The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.

MAN2B1, GM2A, CTBS, NEU1, MAN2B2

GO:0009314

BP

response to radiation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.

ANGPT2, FANCG, MBD4, PENK, COL3A1, NTRK1, JUN, BCL2, TXN, KRT13, JUNB, JUND, CDC25A, CXCL12, SMC1A, ZAK, F11R, TNFRSF11A

GO:0009328

CC

phenylalanine-tRNA ligase complex

An enzyme complex that catalyzes the ligation of phenylalanine to tRNA(Phe), forming L-phenylalanyl-tRNA(Phe).

FARSA

GO:0009330

CC

DNA topoisomerase complex (ATP-hydrolyzing)

Complex that possesses DNA topoisomerase (ATP-hydrolyzing) activity.

TOP2A

GO:0009331

CC

glycerol-3-phosphate dehydrogenase complex

An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate.

GPD2

GO:0009353

CC

mitochondrial oxoglutarate dehydrogenase complex

A complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) ; EC:1.2.4.2 (E1), dihydrolipoamide S-succinyltransferase ; EC:2.3.1.61 (E2) and dihydrolipoamide dehydrogenase ; EC:1.8.1.4 (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) within the mitochondrial matrix. An example of this complex is found in Mus musculus.

MRPS36

GO:0009360

CC

DNA polymerase III complex

The DNA polymerase III holoenzyme is a complex that contains 10 different types of subunits. These subunits are organized into 3 functionally essential sub-assemblies: the pol III core, the beta sliding clamp processivity factor and the clamp-loading complex. The pol III core carries out the polymerase and the 3'-5' exonuclease proofreading activities. The polymerase is tethered to the template via the sliding clamp processivity factor. The clamp-loading complex assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork.

CRCP

GO:0009368

CC

endopeptidase Clp complex

A protein complex comprised of members of the ClpX, ClpC, ClpD, ClpP or ClpR protein families. ClpPs are the proteolytic subunit of active complexes, and ClpA and ClpX form the regulatory subunits. Enzymatically active and inactive complexes can form.

CLPX, CLPP

GO:0009374

MF

biotin binding

Interacting selectively and non-covalently with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.

ACACB, PCCA, PC, MCCC1

GO:0009378

MF

four-way junction helicase activity

Catalysis of the unwinding of the DNA helix of DNA containing four-way junctions, including Holliday junctions.

RECQL4, RECQL, BLM

GO:0009383

MF

rRNA (cytosine-C5-)-methyltransferase activity

Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.

NOP2

GO:0009384

MF

N-acylmannosamine kinase activity

Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate.

GNE

GO:0009395

BP

phospholipid catabolic process

The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.

APOA2, PLCG2, PLA2G4A, ENPP2, NAPEPLD, ABHD6, LIPG

GO:0009396

BP

folic acid-containing compound biosynthetic process

The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.

MTHFD2, MTHFS, MTHFD1L, MTHFD2L

GO:0009398

BP

FMN biosynthetic process

The chemical reactions and pathways resulting in the formation of FMN, the oxidized form of flavin mononucleotide (riboflavin 5'-(dihydrogen phosphate)), which acts as a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.

RFK

GO:0009404

BP

toxin metabolic process

The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.

PAM, CYP1B1, FMO2, AS3MT

GO:0009405

BP

pathogenesis

The set of specific processes that generate the ability of an organism to cause disease in another.

TMEM181

GO:0009408

BP

response to heat

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

MAP2K7, MSTN, TGFB1I1, DNAJA2, PSIP1, IGF1, IL6, HSP90AA1, CD14, HSPD1, CCL2, NOS3, DNAJA1, AKT1, CXCL12, GCLC, EIF2B5, EIF2B1, IGFBP7, MICB, MICA, DNAJA4, TP53INP1, CPB2, EIF2B3, DNAJB4, ASIC3, EIF2B4, TRPV2

GO:0009409

BP

response to cold

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.

FOS, IL6, LPL, ADRB2, HSP90AA1, ADRB1, HSPD1, THRA, ADRB3, ATP2B1, TRH, ADM, GMPR, PPARG, UCP3, CIRBP, CASP8, SLC27A1, PPARGC1A

GO:0009410

BP

response to xenobiotic stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms.

AHRR, GPX1, AHR, GCLC

GO:0009411

BP

response to UV

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.

MAP2K7, USP1, UBE4B, TROVE2, TYR, POLD1, MAPK8, UBE2A, MSH6, UBE2B, PMAIP1, GTF2H2, CIRBP, KIAA0101, MAP4K3, CCAR2, ERCC4, PRIMPOL, TIPIN, RAD18, DTL, SERPINB13

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

TH, AKR1B1, CD9

GO:0009416

BP

response to light stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.

FOS, TH, ASNS, DRD2, JUND, ELK1, DUSP1, SLC1A3, POLG

GO:0009435

BP

NAD biosynthetic process

The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.

NAMPT, QPRT, NADSYN1, NMNAT3, NMRK1

GO:0009436

BP

glyoxylate catabolic process

The chemical reactions and pathways resulting in the breakdown of glyoxylate, the anion of glyoxylic acid, HOC-COOH.

AGXT

GO:0009437

BP

carnitine metabolic process

The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.

SLC22A5, CPT1A, CROT

GO:0009438

BP

methylglyoxal metabolic process

The chemical reactions and pathways involving methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.

GLO1

GO:0009440

BP

cyanate catabolic process

The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid.

MPST

GO:0009441

BP

glycolate metabolic process

The chemical reactions and pathways involving glycolate, the anion of hydroxyethanoic acid (glycolic acid).

IGF1

GO:0009443

BP

pyridoxal 5'-phosphate salvage

Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis.

PDXK

GO:0009444

BP

pyruvate oxidation

The chemical reactions and pathways resulting in the conversion of pyruvate to acetylphosphate.

NR4A3

GO:0009447

BP

putrescine catabolic process

The chemical reactions and pathways resulting in the breakdown of putrescine, 1,4-diaminobutane; putrescine is the metabolic precursor of spermidine and spermine.

SAT1, SAT2

GO:0009448

BP

gamma-aminobutyric acid metabolic process

The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.

PHGDH

GO:0009449

BP

gamma-aminobutyric acid biosynthetic process

The chemical reactions and pathways resulting in the formation of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.

SLC1A3, ABAT

GO:0009450

BP

gamma-aminobutyric acid catabolic process

The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.

ABAT

GO:0009451

BP

RNA modification

The covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically.

PARN

GO:0009566

BP

fertilization

The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).

APOB, NR2F2, NLRP5, BAX, TDRD9, TEX15, SPTBN4, NECTIN3, DUOX2

GO:0009582

BP

detection of abiotic stimulus

The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal.

TIMELESS

GO:0009583

BP

detection of light stimulus

The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal.

OPN3

GO:0009584

BP

detection of visible light

The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.

GRM6, OPN1SW, ELOVL4, OPN3

GO:0009597

BP

detection of virus

The series of events in which a stimulus from a virus is received and converted into a molecular signal.

TLR3, SERINC3, SERINC5

GO:0009605

BP

response to external stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.

INHA, PON1

GO:0009607

BP

response to biotic stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.

TMEM91, PRRT1

GO:0009609

BP

response to symbiotic bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism.

GPX1, PTAFR

GO:0009611

BP

response to wounding

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.

NRP1, F2, PDGFB, TGFB1, FN1, PDGFA, VWF, CYP1A1, CCL2, ITGB4, GAP43, MDK, FGF7, TNC, F2R, ZFP36, CTGF, ADM, SLC1A3, SLC1A2, ZFP36L2, TGFB2, RAC1, CDK5, FABP5, POU5F1, ID3, DST, HHEX, ZFP36L1, GRIN2A, SRSF5, SULF2, NMNAT3, LYVE1

GO:0009612

BP

response to mechanical stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.

ANGPT2, COL3A1, BGLAP, MPO, JUN, DCN, THBS1, ASNS, INHBB, GLI2, CCL2, CCNB1, ETS1, FOSL1, JUNB, JUND, IGFBP2, TNC, PTGER4, CHI3L1, TGFBR2, PPARG, GATA4, CXCL12, MMP14, CLCN6, FOSB, BTG2, PTCH1, POSTN, SOST, TXNIP, TRPV4, RETN, DNAH1

GO:0009615

BP

response to virus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.

DDX3X, DCLK1, BANF1, PRKRA, URI1, TNF, APOB, HSPB1, CYP1A1, ENO1, CHRM2, FGR, CLU, ODC1, IFITM1, CCL4, CCL5, TPT1, CCDC130, IFNGR1, FOSL1, STMN1, HMGA1, IFNAR1, BCL3, TNFSF4, CFL1, PSMA2, IL12A, GTF2F1, IFNGR2, CXCL12, IFNAR2, HMGA2, CXCR4, NPC2, AP1S1, RPS15A, ACTA2, CCL8, CDK6, IFITM3, MEF2C, BST2, HYAL2, TRIM22, LILRB1, IFI44, ISG20, HNRNPUL1, FOXP3, DHX36, DUOX2, TBK1, IRAK3, IVNS1ABP

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

WASL, RAB29, SNX3, CCL2, ADH7, SLC11A1, SERPINB9, CAV1, CD47, CHIT1, FUCA2, ERAP1, BAIAP2L1

GO:0009620

BP

response to fungus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.

BCL10

GO:0009624

BP

response to nematode

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.

CYP1A1, ITLN1

GO:0009628

BP

response to abiotic stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus.

TIMELESS

GO:0009629

BP

response to gravity

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.

MSTN, FOS, BGLAP, SPARC, FOSL1

GO:0009635

BP

response to herbicide

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.

CYP1A1, TH, ALAD, STAR

GO:0009636

BP

response to toxic substance

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.

DHX15, NUPR1, TLR2, AIFM1, CST3, FOS, PENK, TYMS, CDK1, EPHX1, LYN, ASNS, CNP, PDGFRB, CCL3, BCL2, CDK4, CCL4, CCL5, DRD2, NQO1, SDC1, XPA, MPST, FAS, PON1, MAOB, MAPK3, MAPK1, SLC6A1, CHKA, AHR, CDKN1A, MDM2, SLC18A2, RAD51, BAX, SRSF9, BLMH, SCN9A, CYP1B1, WAPL, TRPM6, DNMT3B, HDAC6, SLC7A8, SLC6A14, SLC7A11

GO:0009644

BP

response to high light intensity

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.

RDH13

GO:0009645

BP

response to low light intensity stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.

HMGCS1

GO:0009648

BP

photoperiodism

Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a period of light or dark of a given length, measured relative to a particular duration known as the 'critical day length'. The critical day length varies between species.

NMU

GO:0009649

BP

entrainment of circadian clock

The synchronization of a circadian rhythm to environmental time cues such as light.

PER1, GNA11, GNAQ, ARNTL2

GO:0009650

BP

UV protection

Any process in which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV.

GPX1, ERCC1, ERCC2, FEN1, ERCC4, SDF4

GO:0009651

BP

response to salt stress

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.

KMO, TNF, TH, HSP90AA1, HSP90AB1, BAX

GO:0009653

BP

anatomical structure morphogenesis

The process in which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form.

IGF2BP3, CYR61, EREG, MPZL2, TRIM13, GPC4, FGF18, EYA4, PTBP3, WHSC1, KRT18, TH, HOXB5, CPM, LIG1, F2R, MCAM, IER3, HOXA1, EFNB2, HIRA, TPD52, RAC1, DYNLL1, PKD1, POU5F1, PAX8, MAB21L1, NFE2L1, FAT1, NEDD8, ZNF141, FSCN1, SFRP5, FBN3, SIAH1, CSGALNACT1, EZH1, BICD1, S1PR3, MRPL40, DKK3, SCML1, ERVW-1, SCML2, LYVE1, IGF2BP2

GO:0009673

MF

low-affinity phosphate transmembrane transporter activity

Enables the transfer of phosphate from one side of the membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.

ADAMTS8

GO:0009692

BP

ethylene metabolic process

The chemical reactions and pathways involving ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.

CYP1A1

GO:0009725

BP

response to hormone

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.

TIMP1, ANG, LYN, HCLS1, TIMP2, ADRA1A, NKX2-1, UQCRFS1, GCLC, MMP14, OXCT1, SNRPN, H3F3A, SORD, DHCR24, SFRP4, GHSR, RERG, MMP19, PITX2, TXN2, GHRL

GO:0009743

BP

response to carbohydrate

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus.

CST3, IL1B, APOB, LYN, MDM2

GO:0009744

BP

response to sucrose

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.

ERCC1, SLC6A1, ADIPOQ

GO:0009749

BP

response to glucose

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.

ANGPT2, ENSA, PFKFB2, LDHA, TGFB1, APOA2, LPL, THBS1, COL6A2, GJA1, PFKL, EGR1, TRH, CTGF, SREBF1, TGFBR2, CDKN1B, GYS2, SESN2, PTEN, VAMP2, GPLD1, COL4A3, PPARD, EIF2B5, ACVR2B, EIF2B1, NR0B2, SMAD2, ADIPOQ, SARM1, ILDR2, SLC30A8, BAD, TXN2, VIMP, TXNIP, GPAM, TCF7L2, EIF2B3, EIF2B4, IRS2

GO:0009750

BP

response to fructose

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.

SLC2A5, PTGS2

GO:0009755

BP

hormone-mediated signaling pathway

A series of molecular signals mediated by the detection of a hormone.

AGRP, NR5A2, LATS1, THRA, TRH, LHCGR, FSHR, NUP62, PTPN11, ADIPOR2, GHSR, ADIPOR1, LATS2, GHRL

GO:0009756

BP

carbohydrate mediated signaling

A series of molecular signals mediated by the detection of carbohydrate.

COLEC12, CLEC7A

GO:0009785

BP

blue light signaling pathway

The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm.

CRY1

GO:0009786

BP

regulation of asymmetric cell division

Any process that modulates the frequency, rate or extent of asymmetric cell division.

POU5F1

GO:0009790

BP

embryo development

The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.

NR5A2, BMP2, TDGF1, RASA1, TGFB2, NRG1, PTK2, TDG, RICTOR, UBR3, MDFI, RACGAP1, PDGFC, USP22, RAI2

GO:0009791

BP

post-embryonic development

The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development.

FOXP2, APOB, BCL2, IGF2R, BMP4, ERCC2, FGFR2, SOX6, TGFBR1, NR4A2, PSEN1, SEPP1, GNAQ, SLC18A2, ACVR2B, MORC3, ITPR1, ARID5B, SMAD2, SCN9A, GIGYF2, SCUBE1, PPP1R13L, CCDC47, CSRNP1, SEMA3C, PYGO2, RC3H2, CHST11, DHCR7, KDM5B, AGO2, HEG1, MAPK8IP3

GO:0009792

BP

embryo development ending in birth or egg hatching

The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell.

CYP1A1, FXN

GO:0009798

BP

axis specification

The establishment, maintenance and elaboration of a pattern along a line or around a point.

WNT6

GO:0009804

BP

coumarin metabolic process

The chemical reactions and pathways involving coumarins, compounds derived from the phenylacrylic skeleton of cinnamic acids.

CYP1A1, CYP2D6, CYP2A6

GO:0009812

BP

flavonoid metabolic process

The chemical reactions and pathways involving flavonoids, a group of water-soluble phenolic derivatives containing a flavan skeleton including flavones, flavonols and flavanoids, and anthocyanins.

CYP1A1, SULT1A3

GO:0009813

BP

flavonoid biosynthetic process

The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.

UGT2B4, UGT2A3

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