Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0008430

MF

selenium binding

Interacting selectively and non-covalently with selenium (Se).

SELENOF, GPX3, SEPP1, SELT, SELENBP1, DIO2

GO:0008431

MF

vitamin E binding

Interacting selectively and non-covalently with vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.

SEC14L2

GO:0008432

MF

JUN kinase binding

Interacting selectively and non-covalently with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family.

SPAG9, GSTP1, PTK2, MAPK8IP3, MAPK8IP1

GO:0008434

MF

calcitriol receptor activity

Combining with calcitriol, the hormonally active form of vitamin D3, and transmitting the signal to the transcriptional machinery by interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II.

VDR

GO:0008437

MF

thyrotropin-releasing hormone activity

The action characteristic of thyrotropin-releasing hormone (TRH), a hormone released by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.

TRH

GO:0008440

MF

inositol-1,4,5-trisphosphate 3-kinase activity

Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + 2 H(+).

ITPKA, CALM2, IP6K2

GO:0008442

MF

3-hydroxyisobutyrate dehydrogenase activity

Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+.

HIBADH

GO:0008444

MF

CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity

Catalysis of the reaction: sn-glycerol 3-phosphate + CDP-diacylglycerol = 3-(3-sn-phosphatidyl)-sn-glycerol 1-phosphate + CMP + H(+).

PGS1

GO:0008446

MF

GDP-mannose 4,6-dehydratase activity

Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H(2)O.

GMDS

GO:0008449

MF

N-acetylglucosamine-6-sulfatase activity

Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate.

GNS, SULF2, SULF1

GO:0008453

MF

alanine-glyoxylate transaminase activity

Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine.

AGXT

GO:0008454

MF

alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity

Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R.

MGAT4A, MGAT4B

GO:0008455

MF

alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity

Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R.

MGAT2

GO:0008457

MF

beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity

Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = UDP + N-acetyl-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide.

B3GNT5

GO:0008458

MF

carnitine O-octanoyltransferase activity

Catalysis of the reaction: (R)-carnitine + octanoyl-CoA = (S)-octanoylcarnitine + CoA.

CROT

GO:0008459

MF

chondroitin 6-sulfotransferase activity

Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate.

CHST3, CHST7

GO:0008460

MF

dTDP-glucose 4,6-dehydratase activity

Catalysis of the reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H(2)O.

TGDS

GO:0008465

MF

glycerate dehydrogenase activity

Catalysis of the reaction: (R)-glycerate + NAD+ = hydroxypyruvate + NADH + H+.

GRHPR

GO:0008466

MF

glycogenin glucosyltransferase activity

Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin.

GYG2

GO:0008467

MF

[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate. The [heparan sulfate]-glucosamine 3-sulfate has a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S.

HS3ST1, HS3ST3B1

GO:0008469

MF

histone-arginine N-methyltransferase activity

Catalysis of the reaction: S-adenosyl-L-methionine + (histone)-arginine = S-adenosyl-L-homocysteine + (histone)-N-methyl-arginine.

PRMT3, CARM1, PRMT6

GO:0008474

MF

palmitoyl-(protein) hydrolase activity

Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein.

LYPLA1, LYPLA2, PPT1, PPT2

GO:0008475

MF

procollagen-lysine 5-dioxygenase activity

Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.

PLOD2, PLOD1

GO:0008476

MF

protein-tyrosine sulfotransferase activity

Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate.

TPST1, TPST2

GO:0008478

MF

pyridoxal kinase activity

Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate.

PDXK

GO:0008479

MF

queuine tRNA-ribosyltransferase activity

Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine.

PDC, PDCL, PDCL3

GO:0008480

MF

sarcosine dehydrogenase activity

Catalysis of the reaction: sarcosine + H2O + electron-transfer flavoprotein = glycine + formaldehyde + reduced electron-transfer flavoprotein.

SARDH

GO:0008481

MF

sphinganine kinase activity

Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate.

SPHK1

GO:0008482

MF

sulfite oxidase activity

Catalysis of the reaction: H(2)O + O(2) + sulfite = H(2)O(2) + H(+) + sulfate.

SUOX

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

AGXT, PHYKPL

GO:0008484

MF

sulfuric ester hydrolase activity

Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2.

STS, ARSA, GNS, GALNS, SGSH

GO:0008486

MF

diphosphoinositol-polyphosphate diphosphatase activity

Catalysis of the reaction: diphospho-myo-inositol polyphosphate + H2O = myo-inositol polyphosphate + phosphate.

NUDT3, NUDT10, NUDT11

GO:0008488

MF

gamma-glutamyl carboxylase activity

Catalysis of the reaction: peptidyl-glutamate + reduced vitamin K + CO2 + O2 = peptidyl-gamma-carboxyglutamate + vitamin K epoxide.

GGCX

GO:0008494

MF

translation activator activity

Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.

LARP1, RPS27L, PAIP1

GO:0008496

MF

mannan endo-1,6-alpha-mannosidase activity

Catalysis of the random hydrolysis of (1->6)-alpha-D-mannosidic linkages in unbranched (1->6)-mannans.

MAN2B2

GO:0008499

MF

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity

Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP.

B3GALT2, B3GALT4, B3GNT7, B3GNT5, B3GNT2

GO:0008502

MF

melatonin receptor activity

Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin.

MTNR1A, MTNR1B

GO:0008503

MF

benzodiazepine receptor activity

Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.

TSPO

GO:0008504

MF

monoamine transmembrane transporter activity

Enables the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other.

SLC18A2

GO:0008506

MF

sucrose:proton symporter activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sucrose(out) + H+(out) = sucrose(in) + H+(in).

SLC45A2

GO:0008507

MF

sodium:iodide symporter activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: iodide(out) + Na+(out) = iodide(in) + Na+(in).

SLC5A5

GO:0008509

MF

anion transmembrane transporter activity

Enables the transfer of a negatively charged ion from one side of a membrane to the other.

ABCA1, SLC4A2, SLC4A8, SLC26A11

GO:0008510

MF

sodium:bicarbonate symporter activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in).

SLC4A4

GO:0008511

MF

sodium:potassium:chloride symporter activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + K+(out) + Cl-(out) = Na+(in) + K+(in) + Cl-(in).

SLC12A2

GO:0008513

MF

secondary active organic cation transmembrane transporter activity

Catalysis of the transfer of organic cations from one side of the membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.

SLC22A1

GO:0008514

MF

organic anion transmembrane transporter activity

Enables the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage.

SLC22A23, ABCC5, SLCO2B1

GO:0008517

MF

folic acid transporter activity

Enables the directed movement of folic acid (pteroylglutamic acid) into, out of or within a cell, or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.

SLC19A2, FOLR1, SLC19A1, SLC46A1

GO:0008518

MF

reduced folate carrier activity

Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport.

SLC19A1

GO:0008519

MF

ammonium transmembrane transporter activity

Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

SLC12A2, RHBG

GO:0008520

MF

L-ascorbate:sodium symporter activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ascorbate(out) + Na+(out) = ascorbate(in) + Na+(in).

SLC23A2

GO:0008521

MF

acetyl-CoA transporter activity

Enables the directed movement of acetyl-CoA into, out of or within a cell, or between cells. Acetyl-CoA is a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.

SLC33A1

GO:0008523

MF

sodium-dependent multivitamin transmembrane transporter activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.

SLC23A2

GO:0008525

MF

phosphatidylcholine transporter activity

Enables the directed movement of phosphatidylcholine into, out of or within a cell, or between cells. Phosphatidylcholine refers to a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.

PITPNA, PCTP

GO:0008526

MF

phosphatidylinositol transporter activity

Enables the directed movement of phosphatidylinositol into, out of or within a cell, or between cells. Phosphatidylinositol refers to any glycophospholipids with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.

PITPNA, PITPNC1

GO:0008528

MF

G-protein coupled peptide receptor activity

Combining with a peptide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.

GPR37, NPR3, LHCGR, FSHR

GO:0008531

MF

riboflavin kinase activity

Catalysis of the reaction: ATP + riboflavin = ADP + FMN + 2 H(+).

RFK

GO:0008532

MF

N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity

Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R.

B4GAT1, B3GNT7, B3GNT2

GO:0008534

MF

oxidized purine nucleobase lesion DNA N-glycosylase activity

Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.

NTHL1

GO:0008535

BP

respiratory chain complex IV assembly

The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms.

METTL17, COX11

GO:0008536

MF

Ran GTPase binding

Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.

IPO5, TNPO2, XPO1, BIRC5, RANBP1, RANGAP1, RANBP2, CSE1L, NUTF2, KPNB1, IPO4, IPO9, RANBP9, XPO4, RANGRF, NXT1, NUP50

GO:0008537

CC

proteasome activator complex

A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex.

PSME3

GO:0008540

CC

proteasome regulatory particle, base subcomplex

The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.

PSMD10, PSMC3, PSMC2, PSMC4, PSMC1, PSMC6, PSMD2

GO:0008541

CC

proteasome regulatory particle, lid subcomplex

The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.

PSMD11, PSMD12, PSMD3, SHFM1

GO:0008542

BP

visual learning

Any process in an organism in which a change in behavior of an individual occurs in response to repeated exposure to a visual cue.

KRAS, HMGCR, APP, ITGB1, KIT, DRD2, CREB1, HRH1, ATP1A2, CDK5, GRIN2A, HIF1A, SYNGAP1, NDRG4

GO:0008543

BP

fibroblast growth factor receptor signaling pathway

The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.

POLR2D, FLRT2, RBFOX2, FGF18, FGF19, FGF2, HNRNPA1, UBC, FGFR1, GTF2F2, POLR2E, FGF7, FGFR2, ANOS1, POLR2A, PTBP1, MAPK3, MAPK1, CTGF, POLR2B, FGF9, TIA1, HNRNPH1, GTF2F1, POLR2I, IQGAP1, HNRNPM, POLR2J, NDST1, POLR2K, FGF12, POLR2G, POLR2L, RPS27A, UBA52, GRB2, PTPN11, NCBP1, SETX, SPRED1, CEP57, SHCBP1, FRS2, ESRP2, FLRT3, FLRT1, KL

GO:0008544

BP

epidermis development

The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.

INSR, KRT16, STS, PTHLH, DSP, ATP2A2, FGF7, CTGF, S100A7, SPRR2B, KRT9, ALDH3A2, EMP1, ELF3, ATP2C1, FABP5, SATB1, BNC1, PLOD1, KRT17, PPARA, GAB1, UGCG, LAMA3, SPRR2G, GRHL1, SPRR3, COL17A1

GO:0008553

MF

hydrogen-exporting ATPase activity, phosphorylative mechanism

Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.

ATP6V1G1, ATP6V1G2, ATP6V1C1, ATP6V0D1, ATP6V1C2

GO:0008555

MF

chloride-transporting ATPase activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cl-(out) = ADP + phosphate + Cl-(in).

PCYOX1

GO:0008559

MF

xenobiotic-transporting ATPase activity

Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out).

ABCA8

GO:0008565

MF

protein transporter activity

Enables the directed movement of proteins into, out of or within a cell, or between cells.

IPO5, KPNA3, KPNA4, ITGB1BP1, TNPO2, DSCR3, KPNA5, RANBP6, RAMP1, RAMP3, VPS26A, AP1G2, AP2A2, KPNA2, KPNA1, AP2S1, AP1S2, AP3S2, SEC61G, AP1S1, RAP1A, AP2B1, AP1B1, COG2, KPNB1, C11orf73, ZFYVE16, TOMM5, IPO4, TMCO6, IPO9, VPS35, SEC62, RANGRF, ARFGAP3, EIF4ENIF1, VPS29, AP4S1, TNPO3

GO:0008568

MF

microtubule-severing ATPase activity

Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP.

ATAD1, KATNB1, KATNAL1, SPAST

GO:0008574

MF

ATP-dependent microtubule motor activity, plus-end-directed

Catalysis of movement along a microtubule toward the plus end, coupled to the hydrolysis of ATP.

KIF5C, KIF4A, KIF11, KIF14, KIF18B, KIF18A, KIF20B, KIF3A

GO:0008579

MF

JUN kinase phosphatase activity

Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate.

DUSP19

GO:0008582

BP

regulation of synaptic growth at neuromuscular junction

Any process that modulates the frequency, rate or extent of synaptic growth at neuromuscular junctions.

MUSK, COLQ

GO:0008584

BP

male gonad development

The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure.

TLR3, BCL2L11, SOX15, NUPR1, TLR5, LHB, ESR1, INHA, INSR, ERCC1, INHBA, BCL2, KIT, SRD5A1, WT1, KITLG, LHCGR, RRM1, FSHR, HMGB2, KDM5A, SRD5A2, HOXA10, FGF9, CTNNA1, NUDT1, TGFBR1, WNT5A, AKR1C3, MSH2, GATA4, SOX9, NASP, STAR, MMP14, TNFSF10, NR0B1, SOX8, TGFB2, H3F3A, HMGCS1, PRDX4, MAMLD1, NCOA4, ARID5B, NCOA1, AMHR2, ASPM, SFRP1, GATA6, WNT2B, PITX2, RNF38, PATZ1, AGO4, BOK

GO:0008585

BP

female gonad development

The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure.

IDH1, FSHR, BRCA2, ARID5B, AMHR2, SFRP1, PITX2

GO:0008588

BP

release of cytoplasmic sequestered NF-kappaB

The release of NF-kappaB from specific molecules in the cytoplasm to which it was bound, thereby allowing its translocation into the nucleus.

CD27, TRIP6

GO:0008589

BP

regulation of smoothened signaling pathway

Any process that modulates the frequency, rate or extent of smoothened signaling.

GLI2, FGFR2, OTX2, RORA, GAS1, PTCH1, ZIC1, CREBBP, INTU

GO:0008593

BP

regulation of Notch signaling pathway

Any process that modulates the frequency, rate or extent of the Notch signaling pathway.

CD46, IL6ST, SYNJ2BP, POSTN

GO:0008595

BP

anterior/posterior axis specification, embryo

The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote.

TDGF1, WNT5A, FRS2

GO:0008597

MF

calcium-dependent protein serine/threonine phosphatase regulator activity

Modulation of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.

RCAN1

GO:0008599

MF

protein phosphatase type 1 regulator activity

Modulation of the activity of the enzyme protein phosphatase type 1.

PPP1R15A, PPP1R7

GO:0008601

MF

protein phosphatase type 2A regulator activity

Modulation of the activity of the enzyme protein phosphatase type 2A.

ENSA, PPP2R1A, PPP2R1B, ARPP19, IGBP1, SET, PPP2R3A, PPP2R5C, PPP2R5D, PPP2R5A, PPP2R5B, PPP2R4, ANKLE2, PPME1

GO:0008603

MF

cAMP-dependent protein kinase regulator activity

Modulation of the activity of the enzyme cAMP-dependent protein kinase.

PRKAR1A, PRKAR2A, PRKAR2B, PRKAG1

GO:0008607

MF

phosphorylase kinase regulator activity

Modulation of the activity of the enzyme phosphorylase kinase.

IKBKAP, ELP4, ELP3

GO:0008608

BP

attachment of spindle microtubules to kinetochore

The process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex.

NDC80, ZNF207, BUB3, FAM175B, SGOL1, TEX14, CASC5, AURKB

GO:0008609

MF

alkylglycerone-phosphate synthase activity

Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion.

AGPS

GO:0008610

BP

lipid biosynthetic process

The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

AGPS, ACSL1, SREBF1, PRKAA2, GPAT4, ACSS2, PRPF19

GO:0008611

BP

ether lipid biosynthetic process

The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.

AGPS, GNPAT

GO:0008612

BP

peptidyl-lysine modification to peptidyl-hypusine

The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.

DHPS, EIF5A, DOHH, EIF5A2

GO:0008613

MF

diuretic hormone activity

The action characteristic of a diuretic hormone, any peptide hormone that, upon receptor binding, regulates water balance and fluid secretion.

NPPB

GO:0008615

BP

pyridoxine biosynthetic process

The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds.

PSAT1

GO:0008616

BP

queuosine biosynthetic process

The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.

PDC, PDCL, PDCL3

GO:0008617

BP

guanosine metabolic process

The chemical reactions and pathways involving guanine, guanine riboside, a nucleoside with a wide species distribution.

DGUOK

GO:0008622

CC

epsilon DNA polymerase complex

A heterotetrameric DNA polymerase complex that catalyzes processive DNA synthesis in the absence of PCNA, but is further stimulated in the presence of PCNA. The complex contains a large catalytic subunit and three small subunits, and is best characterized in Saccharomyces, in which the subunits are named Pol2p, Dpb2p, Dpb3p, and Dpb4p. Some evidence suggests that DNA polymerase epsilon is the leading strand polymerase; it is also involved in nucleotide-excision repair and mismatch repair.

POLE2, POLE, POLE4, POLE3, CHRAC1

GO:0008623

CC

CHRAC

An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and additional small histone fold subunits (generally two of these, but Xenopus has only one and some additional non-conserved subunits). CHRAC plays roles in the regulation of RNA polymerase II transcription and in DNA replication and repair.

CHRAC1, BAZ1A

GO:0008625

BP

extrinsic apoptotic signaling pathway via death domain receptors

A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.

DDX3X, TNFRSF10C, NGF, TNF, BCL2, FAS, CD27, PIK3R1, DAPK1, BID, CRADD, BAX, FADD, TRADD, BAD, MOAP1, DDX47

GO:0008626

BP

granzyme-mediated apoptotic signaling pathway

A series of molecular signals induced by granzymes which triggers the apoptotic death of a cell. The pathway starts with reception of a granzyme signal, and ends when the execution phase of apoptosis is triggered. Granzymes are serine proteases that are secreted by cytotoxic T cells and natural killer cells to induce apoptosis in target cells.

UBE4B, SRGN, LAMP1, BNIP3

GO:0008628

BP

hormone-mediated apoptotic signaling pathway

A series of molecular signals mediated by the detection of a hormone, and which triggers the apoptotic signaling pathway in a cell. The pathway starts with reception of a hormone signal, and ends when the execution phase of apoptosis is triggered.

PTH

GO:0008630

BP

intrinsic apoptotic signaling pathway in response to DNA damage

A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.

BCL2L11, TNF, HMOX1, BCL2, TNFRSF1B, XPA, PIK3R1, SFN, BRCA1, MLH1, MSH6, CASP9, PRKDC, E2F1, BAX, MCL1, NFATC4, BCL2L2, BAD, MOAP1, FNIP2, BOK

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