Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0008021

CC

synaptic vesicle

A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.

TOR1A, SYNGR3, STX11, SNAPIN, TH, MME, LAMP1, SYN1, RAB3B, RAB5A, SYT1, MT3, STX2, SNCA, VDAC2, PPT1, CLCN3, SNAP25, ATP6V0D1, VAMP2, DLG4, CDK16, APBA1, SLC18A2, STX4, GRIN2A, STX3, CLN3, MTMR2, SEPT6, RAB11B, STXBP5, SV2A, SV2B, DMXL2, SYT11, TRIM9, NDEL1, MFF, SLC40A1, VTI1B, WDR7, SNCAIP

GO:0008022

MF

protein C-terminus binding

Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.

MIF4GD, MYO1C, FOXN3, KPNA3, SDCBP, PEX12, KCNK3, TAX1BP3, DAPK3, JAK2, TBL1X, VPS4B, YEATS4, EML2, BCL10, ERBB2, ATP1B1, ERCC1, VIM, TOP2A, XRCC5, TCF4, ATP2A2, ERCC2, SDC1, ATF4, NCF2, SYT1, FBLN1, CTGF, CORO1A, YWHAB, STIP1, CTNNB1, PHB, PPP1CC, COIL, ID1, OPRL1, CSK, MSH2, MKI67, YAP1, CENPF, MRE11A, CDK7, BCAM, BRCA2, ATXN1, SYNJ2BP, PPP2CB, DLG4, DAB2, HSPG2, MAP2K1, DST, ZBTB16, RAD51, TJP1, EP300, SREBF2, CDC20, DLG1, ITGB3BP, XRCC4, NPAT, KCNJ11, MDC1, MAPRE1, CEP135, NIPBL, PXK, SIAH1, CEP120, TOPBP1, ERCC4, MED12, OPTN, HIC2, MAGI1, PHB2, CIB1, CITED1, SDCBP2, GOPC, VTA1, MID1IP1, IFT46, HOMER3, RBFOX1, SAE1, PLEKHB1, AGO2, HPCAL4, PRRC2C

GO:0008023

CC

transcription elongation factor complex

Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.

ELL2, IKBKAP, ELOF1, ICE2, ELP4, EAF1, ELP3, AFF4, NUFIP1, TTF2

GO:0008024

CC

cyclin/CDK positive transcription elongation factor complex

A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.

CCNT1, CCNT2, RB1

GO:0008026

MF

ATP-dependent helicase activity

Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

BLM, ERCC6L2, TTF2

GO:0008028

MF

monocarboxylic acid transmembrane transporter activity

Enables the transfer of monocarboxylic acids from one side of the membrane to the other. A monocarboxylic acid is an organic acid with one COOH group.

SLC16A6, SLC16A3, SLC16A7, BSG, SLC16A14, SLC16A9

GO:0008033

BP

tRNA processing

The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

POP7, FARS2, POP4, SARS, LSM6, RPP30, GRSF1, KARS, TYW3, PUS7, TP53RK, TPRKB

GO:0008035

MF

high-density lipoprotein particle binding

Interacting selectively and non-covalently with high-density lipoprotein particle, a lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE.

APOA1, APOA2, CD36, SCARB1, APOL2

GO:0008037

BP

cell recognition

The process in which a cell in an organism interprets its surroundings.

VCAN, PVR, PECAM1, CD200, SMAGP, NECTIN1, CSGALNACT1, CLEC7A, CADM1, NECTIN3

GO:0008043

CC

intracellular ferritin complex

A ferritin complex located in the cell. Intracellular ferritin complexes contain 24 subunits, in a mixture of L (light) chains and H (heavy) chains.

FTL, FTH1

GO:0008045

BP

motor neuron axon guidance

The process in which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues.

HOXA2, KIF5C, SLIT2, ERBB2, EGR2, CHN1, EPHA4, CDK5, ALCAM, RNF165

GO:0008046

MF

axon guidance receptor activity

Combining with an extracellular messenger and transmitting the signal from one side of the membrane to the other to results in a change in cellular activity involved in axon guidance.

EPHB2, EPHB1, ROBO2

GO:0008047

MF

enzyme activator activity

Binds to and increases the activity of an enzyme.

OGT, CFLAR, ASAP2, PPP1R12B, PRKRA, PSAP, CXCL1, TRIM23, MMP15, MMP16, CASP9, PRKCD, TAB1, HSPB2, PITRM1, APOA5, RICTOR, MGST2, RAB3GAP2, SAE1, DBF4, GTF3C4, MMP24

GO:0008048

MF

calcium sensitive guanylate cyclase activator activity

Binds to and increases the activity of guanylate cyclase in response to a change in calcium ion concentration.

GUCA1C, GUCA1B

GO:0008050

BP

female courtship behavior

The behavior of a female, for the purpose of attracting a sexual partner.

THRA

GO:0008053

BP

mitochondrial fusion

Merging of two or more mitochondria within a cell to form a single compartment.

OPA1, MFN2, BAX, FAM73A, MFF

GO:0008057

BP

eye pigment granule organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye.

SHROOM2

GO:0008061

MF

chitin binding

Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.

CHI3L1, CTBS, CHIT1

GO:0008063

BP

Toll signaling pathway

A series of molecular signals initiated by the binding of an extracellular ligand to the receptor Toll on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.

PELI1, PELI2

GO:0008064

BP

regulation of actin polymerization or depolymerization

Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.

CXCL12, SSH2, SSH3

GO:0008065

BP

establishment of blood-nerve barrier

The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier.

GSTM3

GO:0008066

MF

glutamate receptor activity

Combining with glutamate and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.

GRM8, GRM6, GRM3

GO:0008073

MF

ornithine decarboxylase inhibitor activity

The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase.

OAZ2, OAZ1

GO:0008074

CC

guanylate cyclase complex, soluble

Complex that possesses guanylate cyclase activity and is not bound to a membrane.

NPR2, GUCY2D

GO:0008076

CC

voltage-gated potassium channel complex

A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential.

KCNK1, DPP6, SNAP25, CALM2, VAMP2, DLG4, KCNA1, KCNMA1, KCNH2, KCNC3, CTTN, KCNJ11, KCNG3, KCNV2, KCNIP2, KCNG1, KCNK6

GO:0008080

MF

N-acetyltransferase activity

Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.

ESCO2, NAT14, NAT9

GO:0008081

MF

phosphoric diester hydrolase activity

Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.

PLCXD2, PLCXD3

GO:0008083

MF

growth factor activity

The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation.

MSTN, EREG, GDF9, FGF18, DKK1, CSPG5, GDF11, BMP10, FGF19, BMP15, F2, AGT, TIMP1, PDGFB, TGFA, TGFB1, NGF, GH1, IGF2, PPBP, AMH, PDGFA, IGF1, INHA, IL6, GPI, INHBA, FGF2, CXCL1, INHBB, BMP2, BMP4, BMP3, TDGF1, BMP1, HGF, LIF, AREG, VEGFA, TYMP, OGN, IL11, KITLG, MDK, FGF7, BMP6, IL10, BDNF, GRN, CTGF, IL12A, FGF9, BMP8B, BTC, THBS4, LEP, GDF5, CXCL12, PGF, VEGFB, VEGFC, HDGF, INHBC, GFER, FGF12, TGFB2, JAG1, NDP, NRG1, EFEMP1, RABEP1, IL34, BMP8A, FGF13, FGF11, FGF14, HBEGF, GDF15, PDGFD, CD320, PDGFC, CLCF1, OSGIN1, NENF, HDGFRP3

GO:0008088

BP

axo-dendritic transport

The directed movement of organelles or molecules along microtubules in neuron projections.

APP, MAPT, APBA1, KLC3

GO:0008089

BP

anterograde axonal transport

The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons.

AP3D1, KIF1B, KIF4A, SNAPIN, AP3M2, AP3S2, BLOC1S1, BLOC1S3, MGARP, SPAST, RAB21, BLOC1S6, AP3M1

GO:0008090

BP

retrograde axonal transport

The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.

SNAPIN, MGARP, NDEL1

GO:0008091

CC

spectrin

Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins.

SPTBN1, SPTBN4

GO:0008092

MF

cytoskeletal protein binding

Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).

FRMD3, TOR1A, LDB3, NEBL, FARP2, ALDOA, FABP3, ANXA2, TPM1, ALDOC, B4GALT1, DES, PTPN4, CORO1A, ACTN2, CDK5, ANK3, DLG1, PKD2, FLNC, ABI1, DLG5, MYLIP, SORBS1, PACSIN1, EPB41L4B, CAPN10, EPB41L4A, LIN7C, RPH3AL, FARP1

GO:0008093

MF

cytoskeletal adaptor activity

The binding activity of a molecule that brings together a cytoskeletal protein and one or more other molecules, permitting them to function in a coordinated way.

SDCBP, OBSL1, SORBS2, ANK2, ANK3, BICD1, ABI2, BAIAP2L1

GO:0008094

MF

DNA-dependent ATPase activity

Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.

RAD51C, RAD51D, TOP2A, ERCC2, SMARCA1, GTF2H1, CDK7, SMARCA2, SMARCA4, RBBP4, GTF2H2, GTF2H4, DHX36, CHD8, TTF2

GO:0008097

MF

5S rRNA binding

Interacting selectively and non-covalently with 5S ribosomal RNA, the smallest RNA constituent of a ribosome.

EEF2, RPL5

GO:0008104

BP

protein localization

Any process in which a protein is transported to, or maintained in, a specific location.

AKAP10, KIF5C, ULK1, TP53, NPM1, DRD2, TSC2, NR0B1, IST1, CD81, CAV1, GRIN2A, SQSTM1, DHCR24, NEDD8, CROCC, BBS7, NRCAM, KIFAP3, ALS2, BBS2, CLIC5, AKAP7, SLC9A2, MLH3, MAPK8IP3, AKAP2

GO:0008105

BP

asymmetric protein localization

Any process in which a protein is transported to, or maintained in, a specific location such that it is distributed asymmetrically.

COLQ

GO:0008107

MF

galactoside 2-alpha-L-fucosyltransferase activity

Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R.

FUT1, FUT2

GO:0008108

MF

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

Catalysis of the reaction: alpha-D-galactose 1-phosphate + UDP-D-glucose = alpha-D-glucose 1-phosphate + UDP-D-galactose.

GALT

GO:0008109

MF

N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity

Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R.

GCNT2

GO:0008112

MF

nicotinamide N-methyltransferase activity

Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinamide = 1-methylnicotinamide + S-adenosyl-L-homocysteine.

NNMT

GO:0008113

MF

peptide-methionine (S)-S-oxide reductase activity

Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.

TXN2

GO:0008115

MF

sarcosine oxidase activity

Catalysis of the reaction: H(2)O + O(2) + sarcosine = formaldehyde + glycine + H(2)O(2).

PIPOX

GO:0008116

MF

prostaglandin-I synthase activity

Catalysis of the reaction: prostaglandin H(2) = prostaglandin I(2).

PTGIS

GO:0008118

MF

N-acetyllactosaminide alpha-2,3-sialyltransferase activity

Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein.

ST3GAL3

GO:0008119

MF

thiopurine S-methyltransferase activity

Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether.

TPMT

GO:0008120

MF

ceramide glucosyltransferase activity

Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine.

UGCG

GO:0008121

MF

ubiquinol-cytochrome-c reductase activity

Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.

UQCRHL, UQCRQ, UQCR11, UQCRH, UQCRB, UQCRC1, UQCRFS1, UQCR10

GO:0008131

MF

primary amine oxidase activity

Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.

AOC2, VCAM1, MAOA, MAOB, AOC3

GO:0008134

MF

transcription factor binding

Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.

MED19, AIP, APBB1, WWP2, DDX3X, HDAC3, PER1, RBFOX2, KDM1A, SORBS3, CCNT1, TBL1X, NBN, MED6, CREG1, PSMD10, UBXN7, APBB3, BCL10, FOS, MYC, ESR1, TP53, JUN, RB1, HMGB1, PARP1, TRAPPC2, AR, BCL2, THRA, ETS1, TCF3, HMGA1, JUNB, JUND, ATF7, CEBPB, NFKB1, BCL3, FLNA, GPX3, HMGB2, ARNT, PIK3R1, MAPK1, RBL1, CTNNB1, GTF2F1, RORA, DDIT3, AHR, PPARG, ZEB1, PBX2, STAT3, ID1, HTT, GATA4, MAPK9, CENPF, AGTR2, SMARCA4, NR0B1, GTF2A1, GTF2A2, HMGA2, FOSB, CEBPG, HDAC4, SOX8, LMO4, YWHAZ, UBE2I, PRKDC, SMAD3, FOXO4, GTF2B, PURA, E2F1, DR1, ID3, HHEX, PPARD, RELA, TLE1, C1QBP, PPARA, PPID, EP300, FOXC1, STK4, NFATC2, HDAC1, TDG, ENPP2, NFYC, HNRNPD, TFDP1, E2F2, HES1, NFATC4, NR0B2, NCOA2, TWIST1, SMAD2, TAF12, CRY1, HIF1A, IFI16, SMARCD3, KCTD1, CXXC5, PPARGC1B, SIRT2, PPP1R13L, ZFPM2, KAT6B, TRIB2, HDAC2, CREBBP, KAT6A, KAT2B, APBB2, GATA6, ARHGEF2, HES6, PURB, TRIB1, TCF12, PITX2, MDFI, EPAS1, SOST, MYBBP1A, HDAC8, TRIM6, NIF3L1, NUCKS1, SOX17, TAF9B, HES4, PARD6A, BRD7, HEYL, TCF7L2, RNF19A, RCOR3, NLK, PPARGC1A, MLX, HDAC9, SUFU, HDAC5, DRG1, CSDC2, HES2, PAXBP1, HEY1, MAFB, NCOR2, CHCHD2

GO:0008135

MF

translation factor activity, RNA binding

Functions during translation by interacting selectively and non-covalently with RNA during polypeptide synthesis at the ribosome.

EIF4G3, EIF4E2, GATB, EEF1D, EIF2S3, EIF1, EIF1AX, EIF5, EIF4A1, EEF1A2, GTF2H2, CPEB4, CPEB2, CPEB3, ABCF1, GCN1, MTIF3, EIF2B3

GO:0008137

MF

NADH dehydrogenase (ubiquinone) activity

Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.

NDUFS8, NDUFA4, NDUFAB1, NDUFA1, NDUFS4, NDUFA2, NDUFS2, NDUFS6, NDUFB6, NDUFB4, NDUFB8, NDUFA7, NDUFA10, NDUFB10, NDUFB7, NDUFV2, NDUFS1, NDUFV3, NDUFA5, NDUFAF2, NMES1, NDUFA13

GO:0008138

MF

protein tyrosine/serine/threonine phosphatase activity

Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.

PTPDC1, CDC14B, DUSP11, SBF1, DUSP3, TPTE, PTEN, MTMR2, CDKN3, DUSP5, DUSP6, DUSP7, SSH2, DUSP18, SSH3, PTPMT1, PTP4A1, DUSP9, DUSP26, DUSP23, DUSP22, DUSP13, CDC14A

GO:0008139

MF

nuclear localization sequence binding

Interacting selectively and non-covalently with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus.

IPO5, KPNA3, KPNA4, TNPO2, KPNA5, RANBP6, NUP153, KPNA2, KPNA1, KPNB1, IPO4, NUP58, TNPO3

GO:0008140

MF

cAMP response element binding protein binding

Interacting selectively and non-covalently with a cAMP response element binding protein (a CREB protein).

DAPK3, DDIT3, SIK1, CREM, CRTC3

GO:0008142

MF

oxysterol binding

Interacting selectively and non-covalently with oxysterol, an oxidized form of cholesterol.

OSBP, GPR183, RORA

GO:0008143

MF

poly(A) binding

Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.

DDX3X, SYNCRIP, TIA1, KHDRBS1, ZC3H14, RBPMS, PABPC3

GO:0008144

MF

drug binding

Interacting selectively and non-covalently with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.

DHFR, PNP, ALB, MT2A, TYMS, ATP1B1, CHRM2, HSP90AB1, GSTP1, CYP2D6, TOP2A, CYP2C9, ACE, DRD2, FOLR1, CHRM3, CNR1, NME2, MT3, HMGB2, DCK, HTR2C, CHKA, PPARG, HTR2B, NAMPT, ATP5O, GLRB, FASN, ATP1A2, PGGT1B, SRP54, HMGCS1, DHODH, PPARD, PPARA, PPP3CA, PDE4D, FSCN1, SFRP1, P2RX4, SIGMAR1

GO:0008146

MF

sulfotransferase activity

Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate.

HS3ST1, HS6ST1, SULT1A3, SULT2A1, CHST3, DSEL, CHST4, CHST5, CHST2

GO:0008147

MF

structural constituent of bone

The action of a molecule that contributes to the structural integrity of bone.

BGLAP, MGP

GO:0008150

BP

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

TMEM129, TMEM120B, ILVBL, SBNO1, NUDT19, MATN2, DSCR3, KHNYN, FYB, CTDSPL, ABCC4, FLRT2, PI15, SGTA, CALU, AHCYL1, ZNF862, ZFAND5, SORBS2, PROSC, SFT2D2, LRG1, A1BG, PRB1, NUDT7, HIST1H2AG, ZNF688, TPR, HIST1H2AD, BGN, MST1, TM4SF1, SDC2, SLC6A8, MEOX1, LRBA, TMEM50B, EPPK1, SNRPN, MRPS10, SERF2, ZXDB, ZNF200, REEP5, LMNB2, ELP6, MN1, NPRL3, SCGB2A2, COTL1, FAM53B, TMEM187, NOMO1, PPP1R7, FAM189A2, ZNF77, CCDC6, TMEM132A, QRICH1, LRRFIP1, FILIP1L, ARID4B, LRRC23, TMEM35, ANKRD39, BOLA3, TMEM128, NOM1, SLC25A30, IDNK, ANKRD45, CDKAL1, ANKRD40, HIST2H2AA3, TTC27, INO80C, WDR74, SBSN, C5orf46, TMEM107, TMEM108, HSDL2, TMEM91, FAM65A, LHFPL2, PTCHD4, USP53, H2AFV, SLC35D2, KNDC1, TMC6, KDELC2, THNSL2, CARKD, SLC35F2, THNSL1, BEST3, TMEM256, TMEM132C, ZADH2, TMEM57, FAM184A, PDDC1, SLC43A3, GSTCD, ABHD11, WDR36, AGR3, DNAH5, SCFD2, CHAC2, SNRNP27, FAM3C, DCUN1D4, NR4A3, LPGAT1, DPF3, LPP, TMEM106A, KIAA1191, EXOSC8, FLYWCH2, DTD2, DCUN1D1, ZNF486, CYYR1, ZNF75A, ZFP3, KLHL5, CDCA3, TMEM47, TMEM121, H2AFJ, HGH1, C9orf16, TMEM106C, TMEM120A, FSD1L, EMILIN2, RTFDC1, ASPSCR1, UACA, GPR63, PLA2G12A, UBXN6, TM6SF1, ZC3H12C, KLHL4, C20orf27, C6orf62, MKRN2, SPATC1L, CYSTM1, ADAMTS10, TMEM245, GHITM, PLEKHA4, C11orf1, FAM96A, SEC61A2, PLEKHA5, POPDC2, POPDC3, MAGEE1, TMEM8A, EPB41L4A, CD248, MRPL47, RETN, APMAP, IFT46, MXRA5, STRN4, SMCO4, INPP5E, TM7SF3, TMEM51, C1orf123, VNN3, DONSON, MIS18A, GLTSCR2, SEPN1, EMC3, AKAP7, TMEM9, SIPA1L2, IMPACT, STOML1, ARPP21, ZMYM2, CFDP1, EPHA6, FETUB, GPATCH8, C14orf1, EXOG, DIP2C, EPB41L3, RCL1, MRPS28, CCDC53, ZNF330, GPSM3, AIM1, AMMECR1, LRRFIP2

GO:0008152

BP

metabolic process

The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

INSIG1, AQP9, DXO, PRNP, UGT2B4, GSTA1, CPE, PCSK1, DIP2A, CENPV, ECHDC3, L3HYPDH, FAHD2A, TMEM68, ACSS3, ECHDC1, STARD9, SPAST, GRHPR, ENPP5, DIP2C

GO:0008154

BP

actin polymerization or depolymerization

Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.

WASL, DSTN, ABI1, GHSR, ABI2, GHRL, EVL

GO:0008156

BP

negative regulation of DNA replication

Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication.

GMNN, TGFB1, S100A11, NF2, TERF1, PDS5A, WAPL, CDC6, TSPYL2

GO:0008157

MF

protein phosphatase 1 binding

Interacting selectively and non-covalently with the enzyme protein phosphatase 1.

PPP1R15A, STAU1, PPP1CC, PPP1CA, PHACTR4, LILRB1, SH3RF2, CDC5L, AKAP11

GO:0008158

MF

hedgehog receptor activity

Combining with a member of the hedgehog protein family and transmitting the signal across the membrane to initiate a change in cell activity.

PTCH1, B9D1

GO:0008160

MF

protein tyrosine phosphatase activator activity

Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a tyrosyl phenolic group of a protein.

IGFBP3, PPP2R4

GO:0008168

MF

methyltransferase activity

Catalysis of the transfer of a methyl group to an acceptor molecule.

PRMT3, COMT, PRDM15, NDUFAF5, TYW3, METTL23, PRMT1, METTL17, METTL8, PRDM10, METTL5, FAM86C1

GO:0008170

MF

N-methyltransferase activity

Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.

PRMT1

GO:0008171

MF

O-methyltransferase activity

Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.

COMT, BCDIN3D, COQ3

GO:0008173

MF

RNA methyltransferase activity

Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.

BCDIN3D

GO:0008175

MF

tRNA methyltransferase activity

Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in a tRNA molecule.

TRMT13

GO:0008177

MF

succinate dehydrogenase (ubiquinone) activity

Catalysis of the reaction: succinate + ubiquinone = fumarate + ubiquinol.

SDHB, SDHA

GO:0008179

MF

adenylate cyclase binding

Interacting selectively and non-covalently with the enzyme adenylate cyclase.

ADRB2, ADCYAP1R1, CALM2, AKAP6

GO:0008180

CC

COP9 signalosome

A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.

FLOT1, HSP90AB1, HSPA5, HSPA6, TMOD1, HSPA1L, MYH9, GRB2, DYNLL1, AMOT, COPS6, AMOTL1, DOCK7, COPS8, COPS7B

GO:0008184

MF

glycogen phosphorylase activity

Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.

PYGB, PYGM

GO:0008186

MF

RNA-dependent ATPase activity

Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.

DDX17, YTHDC2

GO:0008187

MF

poly-pyrimidine tract binding

Interacting selectively and non-covalently with any stretch of pyrimidines (cytosine or uracil) in an RNA molecule.

PTBP1

GO:0008188

MF

neuropeptide receptor activity

Combining with a neuropeptide to initiate a change in cell activity.

NPBWR1, KISS1R

GO:0008190

MF

eukaryotic initiation factor 4E binding

Interacting selectively and non-covalently with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation.

DDX3X, OTX2, HHEX, EIF4EBP1, EIF4EBP2, LARP1, ANGEL1

GO:0008191

MF

metalloendopeptidase inhibitor activity

Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.

RECK, TIMP1, NGF, TIMP2, TIMP3, COL4A3, BST2, SPOCK2, SPOCK3, LXN, FETUB

GO:0008194

MF

UDP-glycosyltransferase activity

Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.

PIGA

GO:0008195

MF

phosphatidate phosphatase activity

Catalysis of the reaction: a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate.

PLPP1, PLPP3, LPIN1, PLPPR4, PLPP5, PLPPR2

GO:0008198

MF

ferrous iron binding

Interacting selectively and non-covalently with ferrous iron, Fe(II).

TF, TH, SNCA, ALKBH1, FXN, CDO1, HEPH, ISCA1, FTO

GO:0008199

MF

ferric iron binding

Interacting selectively and non-covalently with ferric iron, Fe(III).

TF, FTL, FTH1, TH, FXN, MIOX

GO:0008200

MF

ion channel inhibitor activity

Stops, prevents, or reduces the activity of an ion channel.

ENSA, RACK1

GO:0008201

MF

heparin binding

Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.

CYR61, PDCD5, NRP1, MSTN, ZNF207, NRP2, WISP2, ECM2, SLIT2, WISP1, SERPINC1, KNG1, APOE, APOH, FN1, PF4, ANG, VTN, APOB, APP, SERPINA5, MPO, CLEC3B, LPL, SERPINE2, THBS1, SOD3, CFH, FGF2, SAA1, PTPRF, FGFR1, BMP4, CCL2, PRG2, SELL, VEGFA, OGN, COL5A1, MDK, FGF7, FGFR2, TNXB, ANOS1, COL5A3, PCSK6, CTGF, LRPAP1, FGF9, RPL22, THBS4, FBN1, PLA2G5, RPL29, COMP, PGF, VEGFB, HDGF, CCL8, CXCL6, TGFBR3, APLP2, FMOD, FSTL1, PTCH1, GPNMB, POSTN, PCOLCE, HSD17B12, COL13A1, APOA5, CCDC80, NAV2, SFRP1, NDNF, ADAMTS15, LIPH, HBEGF, EPYC, SOST, LXN, RSPO3, CRISPLD2, SMOC2, GREM2, ADAMTS1, PCOLCE2, ADAMTS5, ADAMTS8, LIPG, ADGRG1

GO:0008202

BP

steroid metabolic process

The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.

HSD17B6, CYP1A1, CYP17A1, CYP2E1, CYP3A4, CYP21A2, SULT1A3, CYP2D6, CYP2A6, CYP2C9, CYP2B6, CYP3A5, CYP3A7, TSPO, G6PC, AKR1C3, AKR1C2, SULT2A1, STARD3, MSMO1, CYP1B1, DHRS4

GO:0008203

BP

cholesterol metabolic process

The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues.

NPC1, LRP5, ERLIN2, ABCA1, CH25H, LDLR, APOA1, APOE, APOA2, APOC1, APOB, APP, CYP11A1, FDX1, CYP11B1, CYP11B2, TNFSF4, PON1, SOAT1, SREBF1, LEP, LEPR, STAR, NPC2, VLDLR, HDLBP, PPARD, LIPE, APOBR, SREBF2, STARD3, EBP, NR0B2, LDLRAP1, PCSK9, SORL1, APOL2, OSBPL1A, CLN6

GO:0008206

BP

bile acid metabolic process

The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.

NR5A2, NPC1, ATP8B1, LEP, FABP6, AKR1C1, NR1H4, GBA2

GO:0008209

BP

androgen metabolic process

The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.

ESR1, CYP3A4, CYP19A1, SRD5A2, ADM, HSD17B4, DHRS9, PPARGC1A

GO:0008210

BP

estrogen metabolic process

The chemical reactions and pathways involving estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.

HSD17B1, COMT, HSD17B4, CYP1B1

GO:0008211

BP

glucocorticoid metabolic process

The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.

APOA1, STAR

GO:0008217

BP

regulation of blood pressure

Any process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.

LRP5, AGT, POMC, SOD2, COL1A2, HMOX1, ACE, CYP11B1, GNB3, NPPB, NPR3, NPR2, PTGS1, EDNRA, NPY1R, NOS3, PTGS2, PPARG, LEP, AGTR2, ATP1A2, ACTA2, HBB, ACSM3, ERAP2, AGTRAP, P2RX4, ERAP1, LNPEP, NISCH

GO:0008218

BP

bioluminescence

The production of light by certain enzyme-catalyzed reactions in cells.

SDC2

GO:0008219

BP

cell death

Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).

AXIN1, BRINP1, BCL10, HMOX1, FOSL2, NUP62, PTGER3, EMP1, EMP2, EMP3, TGFB2, PMP22, BNIP3, CLUL1, FBXO18, SUSD6, OPTN, ALS2, PRKD2, PNPLA8, ZAK, VAPA, FAF1, SNCAIP

GO:0008228

BP

opsonization

The process in which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody.

CRP, C4A, C4B, MBL2, PTX3, CD47, FCN2, SPON2

GO:0008233

MF

peptidase activity

Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.

MASP2, TPP1, DHH, CAPN15, CTSB, CTSH, FURIN, BMP1, UCHL3, CAPN3, PSMB5, CASP9, FGL2, CASP8, SPCS2, CLPP, DESI1, LONP2, MPND, HM13, APH1B, BAP1, PCSK5, USP25, MYRF

GO:0008234

MF

cysteine-type peptidase activity

Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.

CAPN15, CTSL, CTSB, CTSH, CAPN3, CTSK, CTSC, CASP6, BLMH, ESPL1, CASP8, OTUD7B, PIGK, PGPEP1, CTSZ

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