Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0070435

CC

Shc-EGFR complex

A protein complex that contains the epidermal growth factor receptor (EGFR) and the adaptor protein Shc, and is involved in linking EGFR activation to the p21-Ras pathway.

EGFR

GO:0070436

CC

Grb2-EGFR complex

A protein complex that contains the epidermal growth factor receptor (EGFR) and Grb2, and is involved in linking EGFR activation to the p21-Ras pathway.

GRB2, TNK2

GO:0070445

BP

regulation of oligodendrocyte progenitor proliferation

Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation.

CDH2

GO:0070446

BP

negative regulation of oligodendrocyte progenitor proliferation

Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.

SIRT2

GO:0070447

BP

positive regulation of oligodendrocyte progenitor proliferation

Any process that activates or increases the rate or extent of oligodendrocyte progenitor proliferation.

LYN

GO:0070449

CC

elongin complex

A transcription elongation factor complex that suppresses RNA polymerase II pausing, and may act by promoting proper alignment of the 3'-end of nascent transcripts with the polymerase catalytic site. Consists of a transcriptionally active Elongin A subunit (abut 100 kDa)and two smaller Elongin B (about 18 kDa) and Elongin C (about 15 kDa)subunits.

TCEB1, TCEB2

GO:0070458

BP

cellular detoxification of nitrogen compound

Any cellular process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances.

GSTM1, GSTM3, GSTM2

GO:0070459

BP

prolactin secretion

The regulated release of prolactin, a peptide hormone that stimulates lactation, from secretory granules in the anterior pituitary.

ANXA1

GO:0070461

CC

SAGA-type complex

A histone acetyltransferase complex that acetylates nucleosomal H3 and H2B and is required for the expression of a subset of Pol II-transcribed genes. The budding yeast complex includes the acetyltransferase Gcn5p, several proteins of the Spt and Ada families, and several TBP-associate proteins (TAFs); analogous complexes in other species have analogous compositions, and usually contain homologs of the yeast proteins.

TADA2B, SGF29, USP22

GO:0070463

MF

tubulin-dependent ATPase activity

Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of a tubulin dimer to accelerate release of ADP and phosphate.

KIF18A

GO:0070469

CC

respiratory chain

The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.

UQCRHL, UQCRQ, UQCR11, CYC1, CYCS, HIGD1A

GO:0070471

BP

uterine smooth muscle contraction

A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.

AGT

GO:0070474

BP

positive regulation of uterine smooth muscle contraction

Any process that modulates the frequency, rate or extent of uterine smooth muscle contraction.

OXTR, ABAT, GPER1

GO:0070475

BP

rRNA base methylation

The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.

METTL15, NOP2, METTL16, EMG1

GO:0070481

BP

nuclear-transcribed mRNA catabolic process, non-stop decay

The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that is lacking a stop codon.

PELO

GO:0070487

BP

monocyte aggregation

The adhesion of one monocyte to one or more other monocytes via adhesion molecules.

IL1B, CD44

GO:0070488

BP

neutrophil aggregation

The adhesion of one neutrophil to one or more other neutrophils via adhesion molecules.

S100A8, S100A9

GO:0070491

MF

repressing transcription factor binding

Interacting selectively and non-covalently with a transcription repressor, any protein whose activity is required to prevent or downregulate transcription.

ARNTL, GMNN, MYC, EIF4E, HMGB1, SKI, SKIL, TCF3, NFYB, SRI, CTNNB1, CBX5, HDAC4, HHEX, RELA, HDAC1, RUNX2, HDAC7, DDX20, HDAC9, HDAC5, NOC2L

GO:0070492

MF

oligosaccharide binding

Interacting selectively and non-covalently with any oligosaccharide, a molecule with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.

GYPC, SELE, DCBLD1, LOXL2

GO:0070493

BP

thrombin receptor signaling pathway

The series of molecular signals generated as a consequence of a thrombin receptor binding to one of its physiological ligands.

HPGD, F2R, F2RL1, IQGAP2

GO:0070495

BP

negative regulation of thrombin receptor signaling pathway

Any process that stops, prevents, or reduces the frequency, rate or extent of thrombin receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin receptor binding to one of its physiological ligands.

SNCA

GO:0070498

BP

interleukin-1-mediated signaling pathway

A series of molecular signals initiated by the binding of interleukin-1 to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.

IRAK2, RPS6KA5, IL1A, IL1R1, EGR1, MAPK3, IRAK1, PLCB1, IRAK3

GO:0070506

MF

high-density lipoprotein particle receptor activity

Combining with a high-density lipoprotein particle and delivering the high-density lipoprotein into the cell via endocytosis.

SCARB1

GO:0070507

BP

regulation of microtubule cytoskeleton organization

Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.

EPHA3, EFNA5, DIXDC1, PHLDB2, PHLDB1, KIF18A, CYLD, RASSF1, CAMSAP3

GO:0070508

BP

cholesterol import

The directed movement of cholesterol into a cell or organelle.

LDLR, APOA1, CD36, SCARB1, STARD4

GO:0070509

BP

calcium ion import

The directed movement of calcium ions into a cell or organelle.

CASK, CACNA1G, CDK5, MCUR1, TRPV4, SLC30A1

GO:0070512

BP

positive regulation of histone H4-K20 methylation

Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 20 of histone H4.

BRCA1

GO:0070513

MF

death domain binding

Interacting selectively and non-covalently with a death domain of a protein. The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD bind each other forming oligomers. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB.

DAPL1, DAP, CRADD, RIPK1, TRADD

GO:0070522

CC

ERCC4-ERCC1 complex

A heterodimeric nucleotide-excision repair complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are known as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae.

ERCC1, ERCC4

GO:0070524

MF

11-beta-hydroxysteroid dehydrogenase (NADP+) activity

Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.

HSD11B1

GO:0070525

BP

tRNA threonylcarbamoyladenosine metabolic process

The chemical reactions and pathways involving tRNA threonylcarbamoyladenosine, a modified nucleoside found in some tRNA molecules.

TP53RK

GO:0070527

BP

platelet aggregation

The adhesion of one platelet to one or more other platelets via adhesion molecules.

CLIC1, FGA, FGB, FGG, HSPB1, ITGB3, PDGFRA, MYL12A, CSRP1, FLNA, MYL9, MYH9, PIK3CB, PIK3CG, ACTB, RAP2B, STXBP1, ACTG1, HBB, GNAS, TYRO3, ILK, GAS6, GNAS, SLC7A11, TLN1

GO:0070528

BP

protein kinase C signaling

A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.

FLOT1, PDGFB, ZP3, HTR2B, ADGRG1

GO:0070530

MF

K63-linked polyubiquitin binding

Interacting selectively and non-covalently and non-covalently with a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers.

TNFAIP3, SQSTM1, OTUD7B, FAAP20, RNF169, ATRIP, OPTN, ZRANB1

GO:0070531

CC

BRCA1-A complex

A protein complex that contains the BRCA1-BARD1 heterodimer, RAP80/UIMC1, BRCC3/BRCC36, BRE/BRCC45, FAM175A/CCDC98/Abraxas and MERIT40/NBA1, and specifically recognizes and binds K63-linked polyubiquitin chains present on histone H2A and H2AX at DNA damage sites.

BRCA1, BRCC3, BARD1

GO:0070534

BP

protein K63-linked ubiquitination

A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a protein. K63-linked ubiquitination does not target the substrate protein for degradation, but is involved in several pathways, notably as a signal to promote error-free DNA postreplication repair.

WWP2, PARK2, RNF8, UBE2B, UBE2V1, UBE2V2, UBE2S, RNF152, UBE2E3, ITCH, ZFP91, UBE2E2, RNF126, UBE2T, PRPF19, STUB1, UBE2D4

GO:0070535

BP

histone H2A K63-linked ubiquitination

A histone ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a lysine residue in histone H2A or the variant H2AX.

RNF8

GO:0070536

BP

protein K63-linked deubiquitination

A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a protein.

USP27X, TNFAIP3, BRCC3, ATXN3, FAM175B, OTUD1, OTUD7B, USP13, OTUB2, CYLD, ZRANB1, USP25, USP20

GO:0070537

BP

histone H2A K63-linked deubiquitination

A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a lysine residue in histone H2A or the variant H2AX.

BRCC3

GO:0070538

MF

oleic acid binding

Interacting selectively and non-covalently with oleic acid, the 18-carbon monounsaturated fatty acid (9Z)-octadec-9-enoic acid.

FABP3, SCP2

GO:0070539

MF

linoleic acid binding

Interacting selectively and non-covalently with linoleic acid, the 18-carbon unsaturated fatty acid (9Z,12Z)-octadeca-9,12-dienoic acid.

PPARD

GO:0070541

BP

response to platinum ion

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platinum stimulus.

ALAD

GO:0070542

BP

response to fatty acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.

GNPAT, TLR2, ASS1, FABP3, ALAD, CD36, PON1, CTGF, PTGS2, HMGCL, UCP2

GO:0070543

BP

response to linoleic acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.

CD36, ADIPOQ

GO:0070544

BP

histone H3-K36 demethylation

The modification of histone H3 by the removal of a methyl group from lysine at position 36 of the histone.

KDM7A, KDM2A

GO:0070545

CC

PeBoW complex

A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.

BOP1, WDR12, WDR37

GO:0070551

MF

endoribonuclease activity, cleaving siRNA-paired mRNA

Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an siRNA, yielding 5'-phosphomonoesters.

AGO2

GO:0070552

CC

BRISC complex

A protein complex that contains the FAM175B/ABRO1, BRCC3/BRCC36, BRE/BRCC45 and MERIT40/NBA1 proteins, and specifically cleaves K63-linked polyubiquitin chains.

BRCC3, FAM175B

GO:0070554

CC

synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex

A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 3, and a complexin (or orthologs thereof).

CPLX2

GO:0070555

BP

response to interleukin-1

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.

IRAK2, RIPK2, ANXA1, IL1R1, ETS1, SELE, PRKCA, CHI3L1, SNCA, PRKCI, MTHFR, GCLC, HNMT, IRAK1, HDAC4, IGBP1, RELA, AES, SLC30A8, CITED1, YTHDC2, IRAK3, TNFRSF11A

GO:0070557

CC

PCNA-p21 complex

A protein complex that contains the cyclin-dependent protein kinase inhibitor p21WAF1/CIP1 bound to PCNA; formation of the complex inhibits DNA replication.

PCNA, CDKN1A

GO:0070561

BP

vitamin D receptor signaling pathway

The series of molecular signals generated as a consequence of a vitamin D receptor binding to one of its physiological ligands.

VDR

GO:0070563

BP

negative regulation of vitamin D receptor signaling pathway

Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.

SNAI2, KANK2

GO:0070564

BP

positive regulation of vitamin D receptor signaling pathway

Any process that activates or increases the frequency, rate or extent of vitamin D receptor signaling pathway activity.

CYP27B1

GO:0070572

BP

positive regulation of neuron projection regeneration

Any process that activates or increases the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.

HGF

GO:0070573

MF

metallodipeptidase activity

Catalysis of the hydrolysis of a dipeptide by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

ACE, CPQ

GO:0070574

BP

cadmium ion transmembrane transport

A process in which a cadmium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

SLC11A1, SLC11A2, SLC39A8, SLC30A1

GO:0070576

MF

vitamin D 24-hydroxylase activity

Catalysis of the hydroxylation of C-24 of any form of vitamin D.

CYP1A1, CYP3A4

GO:0070577

MF

lysine-acetylated histone binding

Interacting selectively and non-covalently with a histone in which a lysine residue has been modified by acetylation.

BRD4, BRD2, SMARCA4, PSME4, BRD3, CARM1, PHIP, BRD7, BAZ1B

GO:0070578

CC

RISC-loading complex

A trimeric ribonucleoprotein complex that and is required for the formation of a mature RNA induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1) and TRBP (TARBP2) in association with the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.

ZFP36, AGO4, AGO2, DICER1

GO:0070579

MF

methylcytosine dioxygenase activity

Catalysis of the reaction: methylcytosine + 2-oxoglutarate + O2 = 5-hydroxymethylcytosine + succinate + CO2.

ALKBH1

GO:0070584

BP

mitochondrion morphogenesis

The process in which the anatomical structures of a mitochondrion are generated and organized.

NDUFS6, SSBP1, BAX, MTM1, PID1, SUPV3L1, NUBPL, PNPT1, PANK2, SLIRP, MFF, POLDIP2

GO:0070585

BP

protein localization to mitochondrion

A process in which a protein is transported to, or maintained in, a location within the mitochondrion.

PARK2, DNAJA1

GO:0070588

BP

calcium ion transmembrane transport

A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

CACNA1G, ITGAV, ATP2A2, ATP2B1, ZP3, ATP2B4, TRPC1, PSEN1, NCS1, PKD1, ATP2C1, GRIN2A, TRPC3, PKD2, CACNA1C, GAS6, RYR3, CACNA1E, ANO6, DENND5A, DENND5B, TRPV1, TRPM4, TMEM37, CACNG8, CUL5, TRPM7, PANX1, ORAI2, ORAI3, TRPM6, CACNG6, TRPV6, TRPV4, SLC24A3, STIM2, TMCO1, TRPC6, TRPV2

GO:0070602

BP

regulation of centromeric sister chromatid cohesion

Any process that modulates the frequency, rate or extent of sister chromatid cohesion in the centromeric region of a chromosome.

CTNNB1

GO:0070603

CC

SWI/SNF superfamily-type complex

A protein complex that contains an ortholog of the Saccharomyces ATPase Swi2/Snf2 as one of the core components and mediates assembly of nucleosomes, changes to the spacing or structure of nucleosomes, or some combination of those activities in a manner that requires ATP.

ATRX

GO:0070611

MF

histone methyltransferase activity (H3-R2 specific)

Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 2) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 2). This reaction is the addition of a methyl group to arginine at position 2 of histone H3.

PRMT6

GO:0070612

MF

histone methyltransferase activity (H2A-R3 specific)

Catalysis of the reaction: S-adenosyl-L-methionine + (histone H2A)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H2A)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to arginine at position 3 of histone H2A.

PRMT6

GO:0070613

BP

regulation of protein processing

Any process that modulates the frequency, rate or extent of protein processing, any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.

PRKACA, RPS6KA2

GO:0070615

MF

nucleosome-dependent ATPase activity

Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of one or more nucleosomes.

SMARCA1

GO:0070618

CC

Grb2-Sos complex

A protein complex that contains Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.

KHDRBS1

GO:0070625

BP

zymogen granule exocytosis

The release of intracellular molecules contained within the zymogen granule by fusion of the granule with the plasma membrane of the oocyte, requiring calcium ions.

SDF4

GO:0070626

MF

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Catalysis of the reaction: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate = fumarate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.

ADSL

GO:0070627

BP

ferrous iron import

The directed movement of ferrous iron (Fe(II) or Fe2+) ions across a membrane into a cell or organelle.

SLC11A2

GO:0070628

MF

proteasome binding

Interacting selectively and non-covalently with a proteasome, a large multisubunit protein complex that catalyzes protein degradation.

UBD, PSMG1, ID1, ADRM1, USP13, UCHL5

GO:0070633

BP

transepithelial transport

The directed movement of a substance from one side of an epithelium to the other.

CXADR, GPLD1

GO:0070634

BP

transepithelial ammonium transport

The directed movement of ammonium ions from one side of an epithelium to the other.

SLC12A2, RHBG

GO:0070640

BP

vitamin D3 metabolic process

The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.

FGFR1

GO:0070644

MF

vitamin D response element binding

Interacting selectively and non-covalently with the vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.

VDR, TCF3

GO:0070646

BP

protein modification by small protein removal

A protein modification process in which one or more covalently attached groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are removed from a target protein.

SENP6

GO:0070649

BP

formin-nucleated actin cable assembly

The aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.

FMN2

GO:0070652

CC

HAUS complex

A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.

HAUS5, HAUS6, HAUS1, HAUS7, HAUS4, HAUS2

GO:0070653

MF

high-density lipoprotein particle receptor binding

Interacting selectively and non-covalently with a high-density lipoprotein receptor.

APOA1, APOA2, APOC3

GO:0070661

BP

leukocyte proliferation

The expansion of a leukocyte population by cell division.

F2RL1

GO:0070662

BP

mast cell proliferation

The expansion of a mast cell population by cell division.

KIT

GO:0070664

BP

negative regulation of leukocyte proliferation

Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte proliferation.

GSTP1, CCL8

GO:0070667

BP

negative regulation of mast cell proliferation

Any process that stops, prevents or reduces the rate or extent of mast cell proliferation.

LYN

GO:0070668

BP

positive regulation of mast cell proliferation

Any process that activates or increases the rate or extent of mast cell proliferation.

LYN, KITLG

GO:0070669

BP

response to interleukin-2

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-2 stimulus.

STAT5B, JAK3, CITED1

GO:0070670

BP

response to interleukin-4

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus.

STAT5B, JAK3, CITED1

GO:0070671

BP

response to interleukin-12

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.

RIPK2, JAK2

GO:0070672

BP

response to interleukin-15

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.

ACSL4, STAT5B, JAK3

GO:0070673

BP

response to interleukin-18

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.

RIPK2

GO:0070676

BP

intralumenal vesicle formation

The invagination of the endosome membrane and resulting formation of a vesicle within the lumen of the endosome.

SNX3

GO:0070679

MF

inositol 1,4,5 trisphosphate binding

Interacting selectively and non-covalently with inositol 1,4,5 trisphosphate.

TRPC1, TRPC3, ITPR2, ITPR3, ITPR1, PLCL1, TRPC6

GO:0070681

BP

glutaminyl-tRNAGln biosynthesis via transamidation

A tRNA aminoacylation process in which glutaminyl-tRNAGln is formed by a tRNA-dependent two-step pathway. In the first step a non-discriminating glutamyl-tRNAGlx synthetase generates the misacylated L-glutamyl-tRNAGln species, and in the second step it is amidated to the correctly charged L-glutaminyl-tRNAGln by a glutamyl-tRNAGln amidotransferase.

GATC, GATB, QRSL1

GO:0070682

BP

proteasome regulatory particle assembly

The aggregation, arrangement and bonding together of a mature, active proteasome regulatory particle complex.

PSMD10

GO:0070685

CC

macropinocytic cup

A cell projection that forms at the site of macropinocytosis, a form of endocytosis that results in the uptake of relatively large amounts of extracellular fluid. The macropinocytic cup membrane selectively excludes certain proteins, such as H36 or PM4C4 in Dictyostelium, and the underlying cytoskeleton is enriched in F-actin and coronin.

SNX5

GO:0070688

CC

MLL5-L complex

A protein complex that can methylate lysine-4 of histone H3 and plays an essential role in retinoic-acid-induced granulopoiesis. MLL5 is the catalytic methyltransferase subunit, and the complex also contains serine/threonine kinase 38 (STK38), protein phosphatase 1 catalytic subunits, the host cell factor-1 N-terminal subunit, beta-actin, and O-GlcNAc transferase; the human genes encoding the subunits are MLL5, STK38, PPP1CA, PPP1CB, PPP1CC, HCFC1, ACTB and OGT, respectively.

OGT, PPP1CC, ACTB, PPP1CA, PPP1CB, STK38, KMT2E

GO:0070695

CC

FHF complex

A protein complex that is composed of AKTIP/FTS, FAM160A2/p107FHIP, and one or more members of the Hook family of proteins, HOOK1, HOOK2, and HOOK3. The complex is thought to promote vesicle trafficking and/or fusion, and associates with the homotypic vesicular sorting complex (the HOPS complex).

HOOK3, HOOK2, AKTIP

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