IPR010935

SMCs flexible hinge

SMCHD1, SMC2, SMC1A, SMC4, SMC3

IPR010945

Malate dehydrogenase, type 2

MDH1, MDH1B

IPR010978

tRNA-binding arm

SARS

IPR010979

Ribosomal protein S13-like, H2TH

RPS18, NEIL3

IPR010982

Lambda repressor-like, DNA-binding domain

EDF1, POU2F1, HNF1A, SATB1, POU5F1, POU3F1, POU6F1

IPR010987

Glutathione S-transferase, C-terminal-like

CLIC1, GSTA4, EEF1E1, GSTZ1, CLIC3, EPRS, GSTA1, GSTP1, GSTM1, GSTT2, GSTM3, EEF1B2, GSTM2, GSTT1, GSTO1, GSTM4, GSTCD, CLIC6, GSTO2, CLIC5

IPR010989

SNARE

GOSR2, STX7, STX6, STX11, STX2, STX4, STX3, VTI1B

IPR010991

p53, tetramerisation domain

TP53

IPR010992

Integration host factor (IHF)-like DNA-binding domain

CCDC81

IPR010994

RuvA domain 2-like

ERCC1, KIF22, SUPT6H, FANCM, ERCC4, TEFM

IPR010995

DNA repair Rad51/transcription factor NusA, alpha-helical

RAD51

IPR010997

HRDC-like

POLR2D, CRCP, BLM

IPR011001

Saposin-like

PSAP, AOAH

IPR011004

Trimeric LpxA-like

DCTN6, EIF2B5, DCTN5

IPR011005

Dihydropteroate synthase-like

MTR

IPR011008

Dimeric alpha-beta barrel

NECAB2, NECAB3, NIPSNAP1, NIPSNAP3B

IPR011009

Protein kinase-like domain

CDC7, PIK3CD, PIK3C2A, PLK4, RIOK3, MAP2K7, CHEK1, CASK, AURKA, MAST4, DCLK1, MUSK, MAPK13, IRAK2, MAP3K13, DAPK3, MAP3K7, RIPK2, BUB1, PRKY, NUAK1, BUB1B, JAK2, ROCK2, ULK1, ERN1, RPS6KA5, PAK3, STK17B, MAP4K4, LATS1, EGFR, RAF1, ERBB2, NTRK1, PRKCB, INSR, FYN, CDK1, CSF1R, LYN, IGF1R, MET, PDGFRB, FGR, KIT, FGFR1, PSKH1, CDK4, PDGFRA, PRKCA, PRKACA, NPR2, MAK, CDK11B, FGFR2, ERBB3, JAK1, CDK2, ACVR2A, MAPK3, MAPK1, EPHA3, EPHB2, LTK, WEE1, AKT1, AKT2, TTK, GRK5, TIE1, ADRBK2, CHKA, FLT4, MAP2K2, BMPR1A, ACVR1B, TGFBR1, TGFBR2, CSK, MAP3K8, PRKCI, PIK3CA, PIK3CB, ABL2, GRK6, SYK, MAPK8, MAPK9, CSNK1A1, CSNK1D, PIK3CG, MAPKAPK2, CDK8, CSNK1E, CLK2, GSK3B, CDK7, IRAK1, PRKX, NEK2, NEK3, NEK4, JAK3, MAP2K6, PLK1, DAPK1, LIMK2, PRKAA2, EPHA5, EPHB4, EPHB1, EPHA4, SIK1, SRPK2, PRKDC, CDK3, CDK6, CDK5, CDK16, ROR1, MAP2K1, TEK, GUCY2D, PRKCQ, ACVR1, PTK2, PRKCD, RNASEL, TYRO3, TNK2, DDR1, DMPK, MERTK, STK4, MAP2K5, MAPK7, PAK2, PTK7, ILK, PRPF4B, RIPK1, CAMK2D, ACVR2B, BMPR2, CDK13, CAMK1, MELK, CDK10, PRKD1, STK38, ERBB4, RPS6KA2, RPS6KA1, TESK1, MYLK, STK11, PKN1, PKN2, MAPK14, NTRK2, AMHR2, AAK1, SBK1, PAN3, MLK4, CDC42BPA, STYK1, MAST2, PNCK, DSTYK, AATK, NEK10, KNDC1, NRK, PXK, NEK8, STK32C, SGK223, CAMK1D, MAP4K3, TEX14, SCYL3, MINK1, STKLD1, PIK3C3, ANKK1, NEK11, UHMK1, NEK9, STK35, NEK7, GSG2, TTN, TRIB2, DYRK2, SGK3, ULK4, AURKB, MASTL, PBK, SCYL1, MARK4, NEK1, SMG1, ALPK1, TRPM7, PASK, TRIB3, TRIB1, TP53RK, SRPK1, PIK3R4, PKMYT1, MAP3K5, VRK1, MKNK1, CDK19, TRPM6, PINK1, WNK3, PRKD2, STRADB, SIK2, TAOK3, HIPK2, WNK1, CLK4, MKNK2, ETNK1, NEK6, CSNK1G1, LATS2, NRBP2, BMP2K, ZAK, CDK12, PLK2, MARK1, PAK7, EIF2AK4, NLK, PI4KB, EPHA6, TBK1, TNIK, TLK1, TAOK2, CDK11A, AKT3, CHKB, STK38L, SIK3, TRRAP, MAP4K5, CDC42BPB, IRAK3, STK24, CSNK1G3, MAP3K4

IPR011010

DNA breaking-rejoining enzyme, catalytic core

TOP1

IPR011011

Zinc finger, FYVE/PHD-type

PHF20L1, KDM4B, WHSC1, KDM5A, ATRX, MLLT10, TRIM28, CHD4, SHPRH, EEA1, ZMYND11, PHF19, JADE1, KDM7A, ZFYVE16, FGD2, KMT2E, KMT2C, MYRIP, SYTL5, PHF10, KAT6B, RFFL, JADE3, DPF3, KAT6A, SYTL4, ZFYVE19, UHRF2, PHF12, RSF1, UHRF1, ZFYVE21, PYGO2, DIDO1, MLPH, PHF20, WHSC1L1, PLEKHF2, SP110, ZFYVE1, SYTL2, ASH1L, BAZ1A, ING3, MTMR4, PHRF1, ANKFY1, DNMT3B, KDM5B, BAZ1B, KMT2B, RPH3AL, TRIM33, RIMS2, TCF19, PIKFYVE, KDM2A, MTF2, PCLO

IPR011012

Longin-like domain

SEC22B, TRAPPC2, ARCN1, VAMP7, AP3M2, AP2S1, AP1S2, AP3S2, COPZ1, AP1S1, AP2M1, SEC22A, TRAPPC2L, AP3M1, AP4S1, TRAPPC1

IPR011013

Galactose mutarotase-like domain

MAN2B1, MGAM, GAA, MAN2A2, GANAB, MAN2B2

IPR011015

LEM/LEM-like domain

TMPO, TMPO, EMD, ANKLE2, LEMD3

IPR011016

Zinc finger, RING-CH-type

MARCH8, RNF165, MARCH1, MARCH7, RNF24

IPR011017

TRASH domain

ZMYM6, RPL24, ZMYM3, ZMYM2, ZMYM5

IPR011019

KIND domain

KNDC1

IPR011020

HTTM

GGCX

IPR011021

Arrestin-like, N-terminal

ARRDC1, ARRDC4, ARRDC3, TXNIP

IPR011022

Arrestin C-terminal-like domain

ARRDC1, ARRDC4, ARRDC3, TXNIP

IPR011023

Nop2p

NOP2

IPR011024

Gamma-crystallin-related

AIM1

IPR011025

G protein alpha subunit, helical insertion

GNAI2, GNAI3, GNA11, GNAQ, GNAI1, GNA12, GNAS

IPR011026

Wiscott-Aldrich syndrome protein, C-terminal

WASL

IPR011029

Death-like domain

TNFRSF11B, CFLAR, IRAK2, RIPK2, NOL3, TNFRSF21, UNC5C, BCL10, NGFR, NFKB1, FAS, CASP1, CASP4, IRAK1, DAPK1, CASP9, NLRP5, CRADD, ANK2, ANK3, FADD, BIRC3, RIPK1, CASP8, PEA15, TRADD, CARD16, DTHD1, UNC5B, DLG5, EDARADD, TNFRSF25, CARD10, PYCARD, IRAK3

IPR011030

Vitellinogen, superhelical

APOB

IPR011032

GroES-like

CRYZL1, ADH1B, ADH7, FASN, HSPE1, SORD, CRYZ, PTGR1, ZADH2, RTN4IP1, MECR

IPR011033

PRC-barrel-like

CAMSAP2, CAMSAP1, CAMSAP3

IPR011034

Formyl transferase, C-terminal-like

ALDH1L1, MPG, ALDH1L2, MTFMT

IPR011035

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain

EPRS

IPR011037

Pyruvate kinase-like, insert domain

PKM, MARC1, MOCOS

IPR011039

Transcription Factor IIF, Rap30/Rap74, interaction

GTF2F2, GTF2F1

IPR011040

Sialidases

NEU1

IPR011041

Soluble quinoprotein glucose/sorbosone dehydrogenase

OLFM4, HHIP, MED16

IPR011042

Six-bladed beta-propeller, TolB-like

MATN2, LRP5, LRP6, WDHD1, LDLR, NID1, GNB3, PAM, PON1, CORO1A, GNB1, GNB2, VLDLR, LRP2, SELENBP1, PWP1, NID2, RGN, NHLRC3, TENM4, CFAP52, ATG16L2, NHLRC2, WDR48, SORL1, DCAF5, WDR90, HHIP, TRIM2, APMAP, WSB2, DTL, TENM3, CORO1C, WDR3, WDR37

IPR011043

Galactose oxidase/kelch, beta-propeller

KLHDC8A, KLHL28, KLHL8, MKLN1, HCFC2

IPR011044

Quinoprotein amine dehydrogenase, beta chain-like

TBL3, VPS8, OLFM1

IPR011045

Nitrous oxide reductase, N-terminal

WDR1

IPR011047

Quinoprotein alcohol dehydrogenase-like superfamily

EML1, WDR62, TBL1X, ERN1, EML2, AASDH, WDR88, EMC1, BBS1, WDR66, GEMIN5, AHCTF1, WDR90, MLST8, EML4, WDR7

IPR011048

Cytochrome cd1-nitrite reductase-like, haem d1 domain

COPA

IPR011050

Pectin lyase fold/virulence factor

PKHD1L1, SHCBP1, CEMIP, FBXO10

IPR011051

RmlC-like cupin domain

GGCX, CENPC, CDO1, HGD, ADI1

IPR011053

Single hybrid motif

ACACB, PCCA, DLAT, DBT, PC, GCSH, DLST, MCCC1

IPR011054

Rudiment single hybrid motif

ACACB, PCCA, PC, GART, MCCC1

IPR011057

Mss4-like

TPT1, CENPV, MSRB3

IPR011059

Metal-dependent hydrolase, composite domain

DPYSL4, CAD, DPYSL3, DPYSL2

IPR011060

Ribulose-phosphate binding barrel

UMPS

IPR011061

Hirudin/antistatin

CRIM1

IPR011068

Nucleotidyltransferase, class I, C-terminal-like

PAPOLA, PAPOLG

IPR011070

Globular protein, non-globular alpha/beta subunit

UQCRFS1

IPR011072

HR1 rho-binding repeat

PKN1, PKN2, NOSTRIN, RTKN2, RHPN1

IPR011074

CRAL/TRIO, N-terminal domain

SEC14L2, PTPN9, MOSPD2, SEC14L1, TTPAL

IPR011078

COG0325 protein family

PROSC

IPR011082

Exosome-associated factor Rrp47/DNA strand repair C1D

C1D

IPR011084

DNA repair metallo-beta-lactamase

DCLRE1C

IPR011107

Protein phosphatase inhibitor

PPP1R11

IPR011108

Zn-dependent metallo-hydrolase, RNA specificity domain

CPSF3L, CPSF2

IPR011124

Zinc finger, CW-type

MORC3, MORC4

IPR011129

Cold shock domain

YBX1, LIN28A, CARHSP1, CSDC2

IPR011146

HIT-like domain

GALT, HINT1, FHIT, HINT2, HINT3

IPR011161

MHC class I-like antigen recognition-like

HLA-B, HLA-H, HLA-E, CD1D, HLA-G, AZGP1, HLA-A, HLA-C, HLA-F, MICB, MICA, HFE, MR1, ULBP3, ULBP2, PROCR

IPR011162

MHC classes I/II-like antigen recognition protein

HLA-B, HLA-H, HLA-DRA, HLA-DQA2, HLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-E, HLA-DRB4, HLA-DOB, CD1D, HLA-G, HLA-DPA1, AZGP1, HLA-DMA, HLA-DMB, HLA-A, HLA-C, HLA-F, HLA-DRB3, MICB, MICA, HLA-DRB5, HFE, MR1, ULBP3, ULBP2, PROCR

IPR011174

Ezrin/radixin/moesin

EZR, NF2, RDX

IPR011178

Amyloidogenic glycoprotein, copper-binding

APP, APLP2

IPR011184

DNA mismatch repair MutS

MSH2

IPR011206

Citrate lyase beta subunit-like

CLYBL

IPR011234

Fumarylacetoacetase, C-terminal-related

FAH, FAHD2A

IPR011249

Metalloenzyme, LuxS/M16 peptidase-like

NRDC, PMPCB, IDE, UQCRC2, UQCRC1, PMPCA, PITRM1

IPR011257

DNA glycosylase

MBD4, NTHL1, MUTYH

IPR011259

Ezrin/radixin/moesin, C-terminal

EZR, NF2, RDX

IPR011262

DNA-directed RNA polymerase, insert domain

POLR1C

IPR011263

DNA-directed RNA polymerase, RpoA/D/Rpb3-type

POLR1C

IPR011268

Purine nucleoside phosphorylase

PNP

IPR011270

Purine nucleoside phosphorylase I, inosine/guanosine-specific

PNP

IPR011274

Malate dehydrogenase, NAD-dependent, cytosolic

MDH1

IPR011281

Succinate dehydrogenase, flavoprotein subunit

SDHA

IPR011304

L-lactate dehydrogenase

LDHA, LDHB

IPR011320

Ribonuclease H1, N-terminal

ANKLE2

IPR011330

Glycoside hydrolase/deacetylase, beta/alpha-barrel

MAN2B1, MAN2A2, ST6GAL2, MAN2B2

IPR011331

Ribosomal protein L37ae/L37e

RPL37A, RPL37

IPR011332

Zinc-binding ribosomal protein

MRPL33, RPS27, RPL37A, RPL37, RPS27A, RPL36A, RPS27L, RPL36AL, MRPL32

IPR011333

SKP1/BTB/POZ domain

BTBD19, ENC1, BACH1, ZBTB5, ZBTB24, RHOBTB3, ZBTB7A, BCL6, SKP1, ZBTB16, KCNA1, ZBTB17, KCNC3, TCEB1, KLHL12, ZBTB41, KCTD11, SPOPL, KLHL35, KLHL24, KCTD1, KCTD20, ZBTB33, KLHL7, KBTBD2, KLHL36, ABTB2, ZBTB38, KLHL23, KCTD6, ZBTB34, RCBTB1, KCNG3, KCNV2, KCTD13, KLHL6, KCTD12, ZBTB10, GMCL1, HIC2, ZBTB45, KLHL15, KCTD7, KLHL32, KLHL5, BTBD9, BACH2, KLHL4, KCTD10, PATZ1, ZBTB20, MYNN, KBTBD4, KLHL28, ZBTB4, KLHL8, KLHL9, KLHL42, KLHL13, ANKFY1, KLHL3, KCNG1, ZBTB21, BTBD3, IVNS1ABP

IPR011335

Restriction endonuclease type II-like

ERCC1, FANCM, ERCC4, MGME1

IPR011343

Deoxyribose-phosphate aldolase

DERA

IPR011344

Single-stranded DNA-binding protein

SSBP1

IPR011348

17beta-dehydrogenase

HSD17B1

IPR011356

Peptidase M17, leucine aminopeptidase/peptidase B

LAP3

IPR011360

Complement B/C2

CFB

IPR011364

Breast cancer type 1 susceptibility protein (BRCA1)

BRCA1

IPR011381

Histone H3-K9 methyltransferase

SUV39H2

IPR011383

N-lysine methyltransferase SETD6

SETD6

IPR011390

Insulin-like growth factor binding protein-related protein (IGFBP-rP), MAC25

IGFBP7, KAZALD1